Difference between revisions of "TSS:Hg 237197.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000549468.5:-84 ENST00000400167.6:-84 NM_173211:-84 uc060myg.1:-84 uc002kmb.4:-84 |chr=chr18 |cpg_percent=0.025 |distance=-84 |distance_to_tss=84...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TGIF= | ||
|all_trans=ENST00000549468.5:-84 ENST00000400167.6:-84 NM_173211:-84 uc060myg.1:-84 uc002kmb.4:-84 | |all_trans=ENST00000549468.5:-84 ENST00000400167.6:-84 NM_173211:-84 uc060myg.1:-84 uc002kmb.4:-84 | ||
|chr=chr18 | |chr=chr18 | ||
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|distance_to_tss=84 | |distance_to_tss=84 | ||
|end=3453858 | |end=3453858 | ||
| + | |end_of_center_position=8868014 | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4 |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=3453857 | |start=3453857 | ||
| + | |start_of_center_position=8868013 | ||
|strand=+ | |strand=+ | ||
|tata_box="-12(TTTTTTAAAGTG,+,0.00)" | |tata_box="-12(TTTTTTAAAGTG,+,0.00)" | ||
Revision as of 16:54, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 8868013 |
|---|---|
| End of the center position in the TSS region: | 8868014 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000549468.5 ENST00000400167.6 NM_173211 uc060myg.1 uc002kmb.4 |
|---|---|
| Distance: | -84 |
| Num_trans: | 5 |
| All_trans: | ENST00000549468.5:-84 ENST00000400167.6:-84 NM_173211:-84 uc060myg.1:-84 uc002kmb.4:-84 |
TATA-Box annotation
| Distance to TSS: | 84 |
|---|---|
| Nearest PromoterID: | NM_173211 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4 |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-12(TTTTTTAAAGTG,+,0.00)" |
