Difference between revisions of "TSS:Hg 231135.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_014237:7 NM_001190956:7 NM_001320313:7 NR_135201:7 ENST00000265707.9:17 uc003xni.4:17 AK313961:17 ENST00000379866.5:20 uc010lwx.4:20 AY358321:20 ENST...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-8 | |distance_to_tss=-8 | ||
|end=39584561 | |end=39584561 | ||
| + | |end_of_center_position=39584560 | ||
|entrez_id=8749 | |entrez_id=8749 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=ADAM27 | + | |gene_alias=ADAM27 |
|gene_description=ADAM metallopeptidase domain 18 | |gene_description=ADAM metallopeptidase domain 18 | ||
|gene_id=8749 | |gene_id=8749 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=39584558 | |start=39584558 | ||
| + | |start_of_center_position=39584559 | ||
|strand=+ | |strand=+ | ||
| + | |tMDCIII= | ||
|transcript_name=NM_014237 NM_001190956 NM_001320313 NR_135201 | |transcript_name=NM_014237 NM_001190956 NM_001320313 NR_135201 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 18:05, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 39584559 |
|---|---|
| End of the center position in the TSS region: | 39584560 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_014237 NM_001190956 NM_001320313 NR_135201 |
|---|---|
| Distance: | 7 |
| Num_trans: | 25 |
| All_trans: | NM_014237:7 NM_001190956:7 NM_001320313:7 NR_135201:7 ENST00000265707.9:17 uc003xni.4:17 AK313961:17 ENST00000379866.5:20 uc010lwx.4:20 AY358321:20 ENST00000520772.5:24 uc003xnh.4:24 BC070279:24 BC034624:27 KJ892612:58 KJ892613:60 CU687082:61 ENST00000520087.5:62 uc064mfp.1:62 AJ133004:62 BC121045:62 BC121046:62 ENST00000520001.5:-70 uc064mfo.1:-70 AK225744:70 |
TATA-Box annotation
| Distance to TSS: | -8 |
|---|---|
| Nearest PromoterID: | NR_135201 |
| Entrez ID: | 8749 |
| Nearest Unigene: | Hs.127930 |
| Nearest Refseq: | NM_014237 |
| Nearest Ensembl: | ENSG00000168619 |
| Gene Name: | ADAM metallopeptidase domain 18 |
| Gene Alias: | ADAM27 |
| Gene Description: | ADAM metallopeptidase domain 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
