Difference between revisions of "TSS:Hg 10533.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=-16 | |distance_to_tss=-16 | ||
|end=16237214 | |end=16237214 | ||
| + | |end_of_center_position=16237181 | ||
|entrez_id=79363 | |entrez_id=79363 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=16237146 | |start=16237146 | ||
| + | |start_of_center_position=16237180 | ||
|strand=- | |strand=- | ||
|tata_box="76(GGCGTTTAAAGG,-,0.00),77(GCGTTTAAAGGG,-,0.00)" | |tata_box="76(GGCGTTTAAAGG,-,0.00),77(GCGTTTAAAGGG,-,0.00)" | ||
Revision as of 18:26, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 16237180 |
|---|---|
| End of the center position in the TSS region: | 16237181 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375599.7 NM_030907 uc001ayd.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000375599.7:0 NM_030907:0 uc001ayd.4:0 BC002946:196 BC008702:196 CU678308:404 HQ447419:404 KJ899535:404 ENST00000434014.1:488 uc057cqw.1:488 |
TATA-Box annotation
| Distance to TSS: | -16 |
|---|---|
| Nearest PromoterID: | NM_030907 |
| Entrez ID: | 79363 |
| Nearest Unigene: | Hs.546430 |
| Nearest Refseq: | NM_030907 |
| Nearest Ensembl: | ENSG00000132881 |
| Gene Name: | REM2 and RAB like small GTPase 1 |
| Gene Alias: | C1orf89 |
| Gene Description: | REM2 and RAB like small GTPase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "76(GGCGTTTAAAGG,-,0.00),77(GCGTTTAAAGGG,-,0.00)" |
