Difference between revisions of "TSS:Hg 10545.1"
From referenceTSS
| Line 11: | Line 11: | ||
|distance_to_tss=46 | |distance_to_tss=46 | ||
|end=16613610 | |end=16613610 | ||
| + | |end_of_center_position=16613559 | ||
|entrez_id=55672 | |entrez_id=55672 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=AB13 | + | |gene_alias=AB13 |
|gene_description=neuroblastoma breakpoint family member 1 | |gene_description=neuroblastoma breakpoint family member 1 | ||
|gene_id=55672 | |gene_id=55672 | ||
| Line 29: | Line 30: | ||
|species=human | |species=human | ||
|start=16613507 | |start=16613507 | ||
| + | |start_of_center_position=16613558 | ||
|strand=- | |strand=- | ||
|tata_box="-83(GTCCCTTTAAGG,-,0.00),-81(CCCTTTAAGGCC,+,0.00),-80(CCTTTAAGGCCC,+,0.00)" | |tata_box="-83(GTCCCTTTAAGG,-,0.00),-81(CCCTTTAAGGCC,+,0.00),-80(CCTTTAAGGCCC,+,0.00)" | ||
Revision as of 18:28, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 16613558 |
|---|---|
| End of the center position in the TSS region: | 16613559 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000599069.5 ENST00000449853.2 NM_017940 uc001aza.6 uc001azc.3 BC093404 BC110431 AK055895 BC066930 BC010124 BC082236 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000599069.5:0 ENST00000449853.2:0 NM_017940:0 uc001aza.6:0 uc001azc.3:0 BC093404:0 BC110431:0 AK055895:0 BC066930:0 BC010124:0 BC082236:0 ENST00000430580.6:21 ENST00000432949.5:21 uc001ayw.5:21 uc057cry.1:21 AY894575:21 AK123260:251 |
TATA-Box annotation
| Distance to TSS: | 46 |
|---|---|
| Nearest PromoterID: | NM_017940 |
| Entrez ID: | 55672 |
| Nearest Unigene: | Hs.467587 |
| Nearest Refseq: | NM_017940 |
| Nearest Ensembl: | ENSG00000219481 |
| Gene Name: | neuroblastoma breakpoint family member 1 |
| Gene Alias: | AB13 |
| Gene Description: | neuroblastoma breakpoint family member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-83(GTCCCTTTAAGG,-,0.00),-81(CCCTTTAAGGCC,+,0.00),-80(CCTTTAAGGCCC,+,0.00)" |
