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Difference between revisions of "TSS:Hg 10576.1"

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Line 8: Line 8:
 
|distance_to_tss=1
 
|distance_to_tss=1
 
|end=17119459
 
|end=17119459
 +
|end_of_center_position=17119452
 
|entrez_id=11240
 
|entrez_id=11240
 
|gc_percent=0.776119
 
|gc_percent=0.776119
|gene_alias=PAD-H19|PAD2|PDI2
+
|gene_alias=PAD-H19
 
|gene_description=peptidyl arginine deiminase 2
 
|gene_description=peptidyl arginine deiminase 2
 
|gene_id=11240
 
|gene_id=11240
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=17119444
 
|start=17119444
 +
|start_of_center_position=17119451
 
|strand=-
 
|strand=-
 
|transcript_name=NM_007365 AK295783
 
|transcript_name=NM_007365 AK295783

Revision as of 18:34, 10 May 2019

Basic information about the TSS


TSS ID:hg_10576.1
Species:human
Chr:chr1
TSS Classification:yes
Start:17119444
End:17119459
Strand:-
TSS Score:1
Start of the center position in the TSS region:17119451
End of the center position in the TSS region:17119452



Gene and protein annotation


Transcript_name:NM_007365 AK295783
Distance:0
GeneID:11240
HGNC/MGI_ID:HGNC:18341
UniProt_ID:B4DIU3 Q9Y2J8
Gene_name:"peptidyl arginine deiminase, type II"
Gene_symbol:PADI2
Gene_synonyms:KIAA0994 PDI2
Gene_source:HGNC:18341



Transcript annotation


Transcript_name:NM_007365 AK295783
Distance:0
Num_trans:10
All_trans:NM_007365:0 AK295783:0 ENST00000375486.8:10 ENST00000375481.1:10 uc001baf.4:10 uc001bag.2:10 AB023211:10 AB030176:10 BC009701:10 AB587350:74



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NM_007365
Entrez ID:11240
Nearest Unigene:Hs.33455
Nearest Refseq:NM_007365
Nearest Ensembl:ENSG00000117115
Gene Name:"peptidyl arginine deiminase, type II"
Gene Alias:PAD-H19
Gene Description:peptidyl arginine deiminase 2
Gene Type:protein-coding
CpG%:0.135
GC%:0.776119
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):