Difference between revisions of "TSS:Hg 92989.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000541488.1:0 uc064mqj.1:0 |chr=chr8 |cpg_percent=0.005 |distance=0 |distance_to_tss=31027 |end=47929181 |entrez_id=5591 |gc_percent=0.368159 |gen...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |DNAPK= | ||
| + | |DNPK1= | ||
| + | |HYRC= | ||
| + | |HYRC1= | ||
| + | |IMD26= | ||
| + | |XRCC7= | ||
|all_trans=ENST00000541488.1:0 uc064mqj.1:0 | |all_trans=ENST00000541488.1:0 uc064mqj.1:0 | ||
|chr=chr8 | |chr=chr8 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=31027 | |distance_to_tss=31027 | ||
|end=47929181 | |end=47929181 | ||
| + | |end_of_center_position=47929157 | ||
|entrez_id=5591 | |entrez_id=5591 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| − | |gene_alias=DNA-PKcs | + | |gene_alias=DNA-PKcs |
|gene_description="protein kinase, DNA-activated, catalytic polypeptide" | |gene_description="protein kinase, DNA-activated, catalytic polypeptide" | ||
|gene_id=5591 | |gene_id=5591 | ||
| Line 22: | Line 29: | ||
|nearest_unigene=Hs.491682 | |nearest_unigene=Hs.491682 | ||
|num_trans=2 | |num_trans=2 | ||
| + | |p350= | ||
|species=human | |species=human | ||
|start=47929131 | |start=47929131 | ||
| + | |start_of_center_position=47929156 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000541488.1 uc064mqj.1 | |transcript_name=ENST00000541488.1 uc064mqj.1 | ||
Revision as of 18:41, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 47929156 |
|---|---|
| End of the center position in the TSS region: | 47929157 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000541488.1 uc064mqj.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000541488.1:0 uc064mqj.1:0 |
TATA-Box annotation
| Distance to TSS: | 31027 |
|---|---|
| Nearest PromoterID: | NM_006904 |
| Entrez ID: | 5591 |
| Nearest Unigene: | Hs.491682 |
| Nearest Refseq: | NM_006904 |
| Nearest Ensembl: | ENSG00000253729 |
| Gene Name: | "protein kinase, DNA-activated, catalytic polypeptide" |
| Gene Alias: | DNA-PKcs |
| Gene Description: | "protein kinase, DNA-activated, catalytic polypeptide" |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
