Difference between revisions of "TSS:Hg 242850.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000449296.6:-60 ENST00000446141.5:-60 NM_001284310:-60 uc003sjn.5:-60 uc064auw.1:-60 AK092471:-60 ENST00000495686.1:101 uc064avj.1:101 ENST0000045...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |GCS1L= | ||
|all_trans=ENST00000449296.6:-60 ENST00000446141.5:-60 NM_001284310:-60 uc003sjn.5:-60 uc064auw.1:-60 AK092471:-60 ENST00000495686.1:101 uc064avj.1:101 ENST00000453823.5:-358 uc064avd.1:-358 | |all_trans=ENST00000449296.6:-60 ENST00000446141.5:-60 NM_001284310:-60 uc003sjn.5:-60 uc064auw.1:-60 AK092471:-60 ENST00000495686.1:101 uc064avj.1:101 ENST00000453823.5:-358 uc064avd.1:-358 | ||
|chr=chr7 | |chr=chr7 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=60 | |distance_to_tss=60 | ||
|end=927156 | |end=927156 | ||
| + | |end_of_center_position=48049866 | ||
|entrez_id=11033 | |entrez_id=11033 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=CENTA1 | + | |gene_alias=CENTA1 |
|gene_description=ArfGAP with dual PH domains 1 | |gene_description=ArfGAP with dual PH domains 1 | ||
|gene_id=11033 | |gene_id=11033 | ||
| Line 22: | Line 24: | ||
|nearest_unigene=Hs.602573 | |nearest_unigene=Hs.602573 | ||
|num_trans=10 | |num_trans=10 | ||
| + | |p42IP4= | ||
|species=human | |species=human | ||
|start=927155 | |start=927155 | ||
| + | |start_of_center_position=48049865 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000449296.6 ENST00000446141.5 NM_001284310 uc003sjn.5 uc064auw.1 AK092471 | |transcript_name=ENST00000449296.6 ENST00000446141.5 NM_001284310 uc003sjn.5 uc064auw.1 AK092471 | ||
Revision as of 18:42, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48049865 |
|---|---|
| End of the center position in the TSS region: | 48049866 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000449296.6 ENST00000446141.5 NM_001284310 uc003sjn.5 uc064auw.1 AK092471 |
|---|---|
| Distance: | -60 |
| Num_trans: | 10 |
| All_trans: | ENST00000449296.6:-60 ENST00000446141.5:-60 NM_001284310:-60 uc003sjn.5:-60 uc064auw.1:-60 AK092471:-60 ENST00000495686.1:101 uc064avj.1:101 ENST00000453823.5:-358 uc064avd.1:-358 |
TATA-Box annotation
| Distance to TSS: | 60 |
|---|---|
| Nearest PromoterID: | NM_001284310 |
| Entrez ID: | 11033 |
| Nearest Unigene: | Hs.602573 |
| Nearest Refseq: | NM_006869 |
| Nearest Ensembl: | ENSG00000105963 |
| Gene Name: | ArfGAP with dual PH domains 1 |
| Gene Alias: | CENTA1 |
| Gene Description: | ArfGAP with dual PH domains 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
