Difference between revisions of "TSS:Mm 28432.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000029540.12:-47 NM_008727:-47 uc008qcg.1:-47 BC110659:69 BC139767:88 L31932:301 |chr=chr3 |cpg_percent=0.1 |distance=-47 |distance_to_tss=49 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GC-A= | ||
| + | |NPR-A= | ||
| + | |NPRA= | ||
| + | |Pndr= | ||
|all_trans=ENSMUST00000029540.12:-47 NM_008727:-47 uc008qcg.1:-47 BC110659:69 BC139767:88 L31932:301 | |all_trans=ENSMUST00000029540.12:-47 NM_008727:-47 uc008qcg.1:-47 BC110659:69 BC139767:88 L31932:301 | ||
|chr=chr3 | |chr=chr3 | ||
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|distance_to_tss=49 | |distance_to_tss=49 | ||
|end=90465819 | |end=90465819 | ||
| + | |end_of_center_position=90465817 | ||
|entrez_id=18160 | |entrez_id=18160 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=AI893888 | + | |gene_alias=AI893888 |
|gene_description=natriuretic peptide receptor 1 | |gene_description=natriuretic peptide receptor 1 | ||
|gene_id=18160 | |gene_id=18160 | ||
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|species=mouse | |species=mouse | ||
|start=90465814 | |start=90465814 | ||
| + | |start_of_center_position=90465816 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000029540.12 NM_008727 uc008qcg.1 | |transcript_name=ENSMUST00000029540.12 NM_008727 uc008qcg.1 | ||
Revision as of 18:43, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 90465816 |
|---|---|
| End of the center position in the TSS region: | 90465817 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000029540.12 NM_008727 uc008qcg.1 |
|---|---|
| Distance: | -47 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000029540.12:-47 NM_008727:-47 uc008qcg.1:-47 BC110659:69 BC139767:88 L31932:301 |
TATA-Box annotation
| Distance to TSS: | 49 |
|---|---|
| Nearest PromoterID: | NM_008727 |
| Entrez ID: | 18160 |
| Nearest Unigene: | Mm.4627 |
| Nearest Refseq: | NM_008727 |
| Nearest Ensembl: | ENSMUSG00000027931 |
| Gene Name: | natriuretic peptide receptor 1 |
| Gene Alias: | AI893888 |
| Gene Description: | natriuretic peptide receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
