Difference between revisions of "TSS:Hg 1037.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=134 | |distance_to_tss=134 | ||
|end=18631146 | |end=18631146 | ||
| + | |end_of_center_position=18631140 | ||
|entrez_id=5081 | |entrez_id=5081 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=HUP1 | + | |gene_alias=HUP1 |
|gene_description=paired box 7 | |gene_description=paired box 7 | ||
|gene_id=5081 | |gene_id=5081 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=18631133 | |start=18631133 | ||
| + | |start_of_center_position=18631139 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000375375.7 NM_013945 NM_001135254 NM_002584 uc001bay.3 X96743 | |transcript_name=ENST00000375375.7 NM_013945 NM_001135254 NM_002584 uc001bay.3 X96743 | ||
Revision as of 18:44, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 18631139 |
|---|---|
| End of the center position in the TSS region: | 18631140 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375375.7 NM_013945 NM_001135254 NM_002584 uc001bay.3 X96743 |
|---|---|
| Distance: | -128 |
| Num_trans: | 15 |
| All_trans: | ENST00000375375.7:-128 NM_013945:-128 NM_001135254:-128 NM_002584:-128 uc001bay.3:-128 X96743:-128 Z35141:356 ENST00000420770.6:375 uc010oct.3:375 DQ322591:375 ENST00000400661.3:378 uc001baz.4:378 BC121165:378 BC121166:378 KJ897296:458 |
TATA-Box annotation
| Distance to TSS: | 134 |
|---|---|
| Nearest PromoterID: | NM_002584 |
| Entrez ID: | 5081 |
| Nearest Unigene: | Hs.113253 |
| Nearest Refseq: | NM_002584 |
| Nearest Ensembl: | ENSG00000009709 |
| Gene Name: | paired box 7 |
| Gene Alias: | HUP1 |
| Gene Description: | paired box 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
