Difference between revisions of "TSS:Hg 1061.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=104 | |distance_to_tss=104 | ||
|end=19312351 | |end=19312351 | ||
| + | |end_of_center_position=19312350 | ||
|entrez_id=54896 | |entrez_id=54896 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=19312348 | |start=19312348 | ||
| + | |start_of_center_position=19312349 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000400548.6 uc001bbz.4 BC015324 | |transcript_name=ENST00000400548.6 uc001bbz.4 BC015324 | ||
Revision as of 18:51, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19312349 |
|---|---|
| End of the center position in the TSS region: | 19312350 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000400548.6 uc001bbz.4 BC015324 |
|---|---|
| Distance: | -8 |
| Num_trans: | 22 |
| All_trans: | ENST00000400548.6:-8 uc001bbz.4:-8 BC015324:-8 BC021040:8 ENST00000469076.5:-19 uc057cwq.1:-19 AK172745:-19 ENST00000375153.7:-21 uc001bca.4:-21 AK125580:-21 AK130171:-21 ENST00000375155.7:-23 uc001bby.4:-23 AK130175:-23 AK000327:-23 NM_001287531:-103 NM_017765:-103 NM_001040126:-103 NM_001040125:-103 NR_109848:-103 ENST00000497827.1:378 uc057cwr.1:378 |
TATA-Box annotation
| Distance to TSS: | 104 |
|---|---|
| Nearest PromoterID: | NM_001040125 |
| Entrez ID: | 54896 |
| Nearest Unigene: | Hs.647620 |
| Nearest Refseq: | NM_017765 |
| Nearest Ensembl: | ENSG00000040487 |
| Gene Name: | PQ loop repeat containing 2 |
| Gene Alias: | - |
| Gene Description: | PQ loop repeat containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
