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Difference between revisions of "TSS:Hg 11540.1"

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Line 6: Line 6:
 
|distance_to_tss=216
 
|distance_to_tss=216
 
|end=32362033
 
|end=32362033
 +
|end_of_center_position=32362028
 
|entrez_id=100128071
 
|entrez_id=100128071
 
|gc_percent=0.761194
 
|gc_percent=0.761194
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=32362021
 
|start=32362021
 +
|start_of_center_position=32362027
 
|strand=-
 
|strand=-
 
|transcript_name=BC111382
 
|transcript_name=BC111382

Revision as of 21:51, 10 May 2019

Basic information about the TSS


TSS ID:hg_11540.1
Species:human
Chr:chr1
TSS Classification:yes
Start:32362021
End:32362033
Strand:-
TSS Score:1
Start of the center position in the TSS region:32362027
End of the center position in the TSS region:32362028



Gene and protein annotation


Transcript_name:BC111382
Distance:18
GeneID:100128071
HGNC/MGI_ID:HGNC:44652
UniProt_ID:
Gene_name:family with sequence similarity 229 member A
Gene_symbol:FAM229A
Gene_synonyms:
Gene_source:HGNC:44652



Transcript annotation


Transcript_name:BC111382
Distance:18
Num_trans:7
All_trans:BC111382:18 BC073915:-43 ENST00000428500.1:198 uc057ekm.1:198 ENST00000432622.1:-210 NM_001167676:-210 uc021oku.1:-210



TATA-Box annotation


Distance to TSS:216
Nearest PromoterID:NM_001167676
Entrez ID:100128071
Nearest Unigene:Hs.512763
Nearest Refseq:NM_001167676
Nearest Ensembl:ENSG00000225828
Gene Name:family with sequence similarity 229 member A
Gene Alias:-
Gene Description:family with sequence similarity 229 member A
Gene Type:protein-coding
CpG%:0.125
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):