Difference between revisions of "TSS:Hg 2031.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |DYT2= | ||
|all_trans=ENST00000373467.3:-1 uc001bwh.4:-1 ENST00000459874.5:9 uc057enl.1:9 DQ426877:29 AK313907:40 NM_002143:44 BC001777:44 ENST00000480118.5:-354 uc057enk.1:-354 ENST00000470166.5:-442 uc057enj.1:-442 | |all_trans=ENST00000373467.3:-1 uc001bwh.4:-1 ENST00000459874.5:9 uc057enl.1:9 DQ426877:29 AK313907:40 NM_002143:44 BC001777:44 ENST00000480118.5:-354 uc057enk.1:-354 ENST00000470166.5:-442 uc057enj.1:-442 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-53 | |distance_to_tss=-53 | ||
|end=32886453 | |end=32886453 | ||
| + | |end_of_center_position=32886445 | ||
|entrez_id=3208 | |entrez_id=3208 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| − | |gene_alias=BDR2 | + | |gene_alias=BDR2 |
|gene_description=hippocalcin | |gene_description=hippocalcin | ||
|gene_id=3208 | |gene_id=3208 | ||
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|species=human | |species=human | ||
|start=32886435 | |start=32886435 | ||
| + | |start_of_center_position=32886444 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000373467.3 uc001bwh.4 | |transcript_name=ENST00000373467.3 uc001bwh.4 | ||
Revision as of 21:57, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 32886444 |
|---|---|
| End of the center position in the TSS region: | 32886445 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000373467.3 uc001bwh.4 |
|---|---|
| Distance: | -1 |
| Num_trans: | 12 |
| All_trans: | ENST00000373467.3:-1 uc001bwh.4:-1 ENST00000459874.5:9 uc057enl.1:9 DQ426877:29 AK313907:40 NM_002143:44 BC001777:44 ENST00000480118.5:-354 uc057enk.1:-354 ENST00000470166.5:-442 uc057enj.1:-442 |
TATA-Box annotation
| Distance to TSS: | -53 |
|---|---|
| Nearest PromoterID: | NM_002143 |
| Entrez ID: | 3208 |
| Nearest Unigene: | Hs.632391 |
| Nearest Refseq: | NM_002143 |
| Nearest Ensembl: | ENSG00000121905 |
| Gene Name: | hippocalcin |
| Gene Alias: | BDR2 |
| Gene Description: | hippocalcin |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
