Difference between revisions of "TSS:Hg 237597.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK289509:-72 AK090732:-89 ENST00000593074.5:-104 NM_001199570:-104 uc010eeq.3:-104 AK294748:-201 KJ893505:209 CU680510:209 BC013116:-240 ENST00000592017...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CLIPR59= | ||
| + | |RSNL1= | ||
|all_trans=AK289509:-72 AK090732:-89 ENST00000593074.5:-104 NM_001199570:-104 uc010eeq.3:-104 AK294748:-201 KJ893505:209 CU680510:209 BC013116:-240 ENST00000592017.5:-304 uc060xmb.1:-304 AJ427922:-306 AK092354:-307 ENST00000586457.1:-319 uc060xmd.1:-319 ENST00000360535.8:-326 uc002ocz.3:-326 AK094738:-326 NM_015526:-328 | |all_trans=AK289509:-72 AK090732:-89 ENST00000593074.5:-104 NM_001199570:-104 uc010eeq.3:-104 AK294748:-201 KJ893505:209 CU680510:209 BC013116:-240 ENST00000592017.5:-304 uc060xmb.1:-304 AJ427922:-306 AK092354:-307 ENST00000586457.1:-319 uc060xmd.1:-319 ENST00000360535.8:-326 uc002ocz.3:-326 AK094738:-326 NM_015526:-328 | ||
|chr=chr19 | |chr=chr19 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=104 | |distance_to_tss=104 | ||
|end=36032567 | |end=36032567 | ||
| + | |end_of_center_position=45692240 | ||
|entrez_id=25999 | |entrez_id=25999 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=CLIPR-59 | + | |gene_alias=CLIPR-59 |
|gene_description=CAP-Gly domain containing linker protein 3 | |gene_description=CAP-Gly domain containing linker protein 3 | ||
|gene_id=25999 | |gene_id=25999 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=36032566 | |start=36032566 | ||
| + | |start_of_center_position=45692239 | ||
|strand=- | |strand=- | ||
|transcript_name=AK289509 | |transcript_name=AK289509 | ||
Revision as of 00:13, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 45692239 |
|---|---|
| End of the center position in the TSS region: | 45692240 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK289509 |
|---|---|
| Distance: | -72 |
| Num_trans: | 19 |
| All_trans: | AK289509:-72 AK090732:-89 ENST00000593074.5:-104 NM_001199570:-104 uc010eeq.3:-104 AK294748:-201 KJ893505:209 CU680510:209 BC013116:-240 ENST00000592017.5:-304 uc060xmb.1:-304 AJ427922:-306 AK092354:-307 ENST00000586457.1:-319 uc060xmd.1:-319 ENST00000360535.8:-326 uc002ocz.3:-326 AK094738:-326 NM_015526:-328 |
TATA-Box annotation
| Distance to TSS: | 104 |
|---|---|
| Nearest PromoterID: | NM_001199570 |
| Entrez ID: | 25999 |
| Nearest Unigene: | Hs.466539 |
| Nearest Refseq: | NM_015526 |
| Nearest Ensembl: | ENSG00000105270 |
| Gene Name: | CAP-Gly domain containing linker protein 3 |
| Gene Alias: | CLIPR-59 |
| Gene Description: | CAP-Gly domain containing linker protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
