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Difference between revisions of "TSS:Hg 100259.1"

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Line 23: Line 23:
 
|distance_to_tss=-111
 
|distance_to_tss=-111
 
|end=21975250
 
|end=21975250
 +
|end_of_center_position=21975244
 
|entrez_id=1029
 
|entrez_id=1029
 
|gc_percent=0.626866
 
|gc_percent=0.626866
|gene_alias=ARF|CDK4I|CDKN2|CMM2|INK4|INK4A|MLM|MTS-1|MTS1|P14|P14ARF|P16|P16-INK4A|P16INK4|P16INK4A|P19|P19ARF|TP16
+
|gene_alias=ARF
 
|gene_description=cyclin dependent kinase inhibitor 2A
 
|gene_description=cyclin dependent kinase inhibitor 2A
 
|gene_id=1029
 
|gene_id=1029
Line 41: Line 42:
 
|species=human
 
|species=human
 
|start=21975237
 
|start=21975237
 +
|start_of_center_position=21975243
 
|strand=-
 
|strand=-
 
|transcript_name=NM_000077 NM_001195132
 
|transcript_name=NM_000077 NM_001195132

Revision as of 05:35, 11 May 2019

Basic information about the TSS


TSS ID:hg_100259.1
Species:human
Chr:chr9
TSS Classification:yes
Start:21975237
End:21975250
Strand:-
TSS Score:1
Start of the center position in the TSS region:21975243
End of the center position in the TSS region:21975244



Gene and protein annotation


Transcript_name:NM_000077 NM_001195132
Distance:105
GeneID:1029
HGNC/MGI_ID:HGNC:1787
UniProt_ID:P42771
Gene_name:cyclin-dependent kinase inhibitor 2A
Gene_symbol:CDKN2A
Gene_synonyms:ARF CDK4I CMM2 INK4 INK4a MTS1 p14 p14ARF p16 p16INK4a p19 p19Arf
Gene_source:HGNC:1787



Transcript annotation


Transcript_name:NM_000077 NM_001195132
Distance:105
Num_trans:18
All_trans:NM_000077:105 NM_001195132:105 ENST00000304494.9:140 uc003zpk.4:140 KC814157:371 L27211:371 JQ694043:371 JQ694044:371 JQ694045:371 ENST00000498124.1:372 uc010miu.4:372 DQ318021:372 ENST00000579122.1:380 uc064skb.1:380 ENST00000380151.3:411 NM_058197:411 uc003zpj.4:411 AF115544:411



TATA-Box annotation


Distance to TSS:-111
Nearest PromoterID:NM_001195132
Entrez ID:1029
Nearest Unigene:Hs.512599
Nearest Refseq:NM_000077
Nearest Ensembl:ENSG00000147889
Gene Name:cyclin-dependent kinase inhibitor 2A
Gene Alias:ARF
Gene Description:cyclin dependent kinase inhibitor 2A
Gene Type:protein-coding
CpG%:0.07
GC%:0.626866
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):