Difference between revisions of "TSS:Hg 100295.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=103 | |distance_to_tss=103 | ||
|end=23825965 | |end=23825965 | ||
| + | |end_of_center_position=23825962 | ||
|entrez_id=1993 | |entrez_id=1993 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
| − | |gene_alias=HEL-N1 | + | |gene_alias=HEL-N1 |
|gene_description=ELAV like RNA binding protein 2 | |gene_description=ELAV like RNA binding protein 2 | ||
|gene_id=1993 | |gene_id=1993 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=23825958 | |start=23825958 | ||
| + | |start_of_center_position=23825961 | ||
|strand=- | |strand=- | ||
|tata_box="-82(GTCTTTTTAAAC,-,0.00),-80(CTTTTTAAACTC,+,0.00),23(TCTTTTAAGCCG,+,0.00)" | |tata_box="-82(GTCTTTTTAAAC,-,0.00),-80(CTTTTTAAACTC,+,0.00),23(TCTTTTAAGCCG,+,0.00)" | ||
Revision as of 05:42, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 23825961 |
|---|---|
| End of the center position in the TSS region: | 23825962 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000397312.6 NM_004432 uc003zpu.4 AB209294 |
|---|---|
| Distance: | -100 |
| Num_trans: | 10 |
| All_trans: | ENST00000397312.6:-100 NM_004432:-100 uc003zpu.4:-100 AB209294:-100 ENST00000462649.1:-209 uc064skx.1:-209 U12431:-338 U29943:-338 ENST00000380117.5:-372 uc003zpv.4:-372 |
TATA-Box annotation
| Distance to TSS: | 103 |
|---|---|
| Nearest PromoterID: | NM_004432 |
| Entrez ID: | 1993 |
| Nearest Unigene: | Hs.166109 |
| Nearest Refseq: | NM_004432 |
| Nearest Ensembl: | ENSG00000107105 |
| Gene Name: | ELAV like neuron-specific RNA binding protein 2 |
| Gene Alias: | HEL-N1 |
| Gene Description: | ELAV like RNA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-82(GTCTTTTTAAAC,-,0.00),-80(CTTTTTAAACTC,+,0.00),23(TCTTTTAAGCCG,+,0.00)" |
