Difference between revisions of "TSS:Hg 100333.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=-10 | |distance_to_tss=-10 | ||
|end=27297154 | |end=27297154 | ||
| + | |end_of_center_position=27297149 | ||
|entrez_id=54586 | |entrez_id=54586 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=AFAF | + | |gene_alias=AFAF |
|gene_description=equatorin | |gene_description=equatorin | ||
|gene_id=54586 | |gene_id=54586 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=27297143 | |start=27297143 | ||
| + | |start_of_center_position=27297148 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000380032.7 NM_001161585 NM_020641 uc003zql.4 AJ278482 | |transcript_name=ENST00000380032.7 NM_001161585 NM_020641 uc003zql.4 AJ278482 | ||
Revision as of 05:48, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 27297148 |
|---|---|
| End of the center position in the TSS region: | 27297149 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000380032.7 NM_001161585 NM_020641 uc003zql.4 AJ278482 |
|---|---|
| Distance: | 5 |
| Num_trans: | 16 |
| All_trans: | ENST00000380032.7:5 NM_001161585:5 NM_020641:5 uc003zql.4:5 AJ278482:5 ENST00000537675.5:8 ENST00000380031.2:8 uc011lnq.3:8 uc003zqm.4:8 BC014307:8 BC137351:35 BC137352:35 BC144602:35 KJ902669:89 ENST00000484994.1:404 uc064smi.1:404 |
TATA-Box annotation
| Distance to TSS: | -10 |
|---|---|
| Nearest PromoterID: | NM_020641 |
| Entrez ID: | 54586 |
| Nearest Unigene: | Hs.163070 |
| Nearest Refseq: | NM_020641 |
| Nearest Ensembl: | ENSG00000120160 |
| Gene Name: | equatorin |
| Gene Alias: | AFAF |
| Gene Description: | equatorin |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
