Difference between revisions of "TSS:Hg 100393.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=-60 | |distance_to_tss=-60 | ||
|end=32552175 | |end=32552175 | ||
| + | |end_of_center_position=32552174 | ||
|entrez_id=100129250 | |entrez_id=100129250 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=32552172 | |start=32552172 | ||
| + | |start_of_center_position=32552173 | ||
|strand=- | |strand=- | ||
|tata_box="-60(CCTTTTAGAGAG,+,0.00)" | |tata_box="-60(CCTTTTAGAGAG,+,0.00)" | ||
Revision as of 05:58, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 32552173 |
|---|---|
| End of the center position in the TSS region: | 32552174 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000360538.6 ENST00000379858.1 uc003zrb.4 uc003zrc.4 AB045732 AB045733 AF098300 |
|---|---|
| Distance: | -378 |
| Num_trans: | 10 |
| All_trans: | ENST00000360538.6:-378 ENST00000379858.1:-378 uc003zrb.4:-378 uc003zrc.4:-378 AB045732:-378 AB045733:-378 AF098300:-378 BC060884:-393 NM_005802:-453 NM_001195622:-453 |
TATA-Box annotation
| Distance to TSS: | -60 |
|---|---|
| Nearest PromoterID: | NR_102376 |
| Entrez ID: | 100129250 |
| Nearest Unigene: | Hs.664395 |
| Nearest Refseq: | NR_033991 |
| Nearest Ensembl: | ENSG00000235453 |
| Gene Name: | "topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase" |
| Gene Alias: | C9orf133 |
| Gene Description: | TOPORS antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-60(CCTTTTAGAGAG,+,0.00)" |
