Difference between revisions of "TSS:Hg 100504.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=132 | |distance_to_tss=132 | ||
|end=34381481 | |end=34381481 | ||
| + | |end_of_center_position=34381469 | ||
|entrez_id=84688 | |entrez_id=84688 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=CBE1 | + | |gene_alias=CBE1 |
|gene_description=chromosome 9 open reading frame 24 | |gene_description=chromosome 9 open reading frame 24 | ||
|gene_id=84688 | |gene_id=84688 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=34381455 | |start=34381455 | ||
| + | |start_of_center_position=34381468 | ||
|strand=- | |strand=- | ||
|tata_box="-38(ACCCCTAAAAGG,-,0.00)" | |tata_box="-38(ACCCCTAAAAGG,-,0.00)" | ||
Revision as of 06:17, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 34381468 |
|---|---|
| End of the center position in the TSS region: | 34381469 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK225981 |
|---|---|
| Distance: | -19 |
| Num_trans: | 14 |
| All_trans: | AK225981:-19 ENST00000379124.5:-50 uc064srw.1:-50 ENST00000379126.7:-57 uc003zuf.3:-57 AF367474:-57 ENST00000379127.1:-79 uc022bgb.3:-79 AK094751:-108 ENST00000379133.7:-119 NM_001252195:-119 NM_147168:-119 NM_147169:-119 uc003zug.3:-119 |
TATA-Box annotation
| Distance to TSS: | 132 |
|---|---|
| Nearest PromoterID: | NM_147168 |
| Entrez ID: | 84688 |
| Nearest Unigene: | Hs.50334 |
| Nearest Refseq: | NM_032596 |
| Nearest Ensembl: | ENSG00000164972 |
| Gene Name: | chromosome 9 open reading frame 24 |
| Gene Alias: | CBE1 |
| Gene Description: | chromosome 9 open reading frame 24 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-38(ACCCCTAAAAGG,-,0.00)" |
