Difference between revisions of "TSS:Hg 100570.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=26 | |distance_to_tss=26 | ||
|end=35103176 | |end=35103176 | ||
| + | |end_of_center_position=35103170 | ||
|entrez_id=30968 | |entrez_id=30968 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=HSPC108 | + | |gene_alias=HSPC108 |
|gene_description=stomatin like 2 | |gene_description=stomatin like 2 | ||
|gene_id=30968 | |gene_id=30968 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=35103162 | |start=35103162 | ||
| + | |start_of_center_position=35103169 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000356493.9 uc003zwi.5 AF190167 | |transcript_name=ENST00000356493.9 uc003zwi.5 AF190167 | ||
Revision as of 06:30, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 35103169 |
|---|---|
| End of the center position in the TSS region: | 35103170 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000356493.9 uc003zwi.5 AF190167 |
|---|---|
| Distance: | 6 |
| Num_trans: | 28 |
| All_trans: | ENST00000356493.9:6 uc003zwi.5:6 AF190167:6 ENST00000452248.6:-19 ENST00000619795.4:-19 NM_001287031:-19 NM_001287032:-19 NM_013442:-19 NM_001287033:-19 uc011lou.3:-19 uc033cps.1:-19 AK223102:19 AK303883:30 BC002442:32 AK307343:34 BC010152:35 AK027405:35 AF282596:35 AK225114:35 AK130546:37 BC014990:37 AK308552:37 BC003025:47 DQ892677:68 KJ898778:69 DQ895920:69 CU677964:69 AF161458:92 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NM_001287033 |
| Entrez ID: | 30968 |
| Nearest Unigene: | Hs.3439 |
| Nearest Refseq: | NM_013442 |
| Nearest Ensembl: | ENSG00000165283 |
| Gene Name: | stomatin like 2 |
| Gene Alias: | HSPC108 |
| Gene Description: | stomatin like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
