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Difference between revisions of "TSS:Hg 100679.1"

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Line 10: Line 10:
 
|distance_to_tss=33
 
|distance_to_tss=33
 
|end=36258471
 
|end=36258471
 +
|end_of_center_position=36258466
 
|entrez_id=10020
 
|entrez_id=10020
 
|gc_percent=0.716418
 
|gc_percent=0.716418
|gene_alias=DMRV|GLCNE|IBM2|NM|Uae1
+
|gene_alias=DMRV
 
|gene_description=glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
 
|gene_description=glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
 
|gene_id=10020
 
|gene_id=10020
Line 28: Line 29:
 
|species=human
 
|species=human
 
|start=36258460
 
|start=36258460
 +
|start_of_center_position=36258465
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000539208.5 uc011lpl.4 AK295562
 
|transcript_name=ENST00000539208.5 uc011lpl.4 AK295562

Revision as of 06:52, 11 May 2019

Basic information about the TSS


TSS ID:hg_100679.1
Species:human
Chr:chr9
TSS Classification:yes
Start:36258460
End:36258471
Strand:-
TSS Score:1
Start of the center position in the TSS region:36258465
End of the center position in the TSS region:36258466



Gene and protein annotation


Transcript_name:ENST00000539208.5 uc011lpl.4 AK295562
Distance:16
GeneID:10020
HGNC/MGI_ID:HGNC:23657
UniProt_ID:Q9Y223
Gene_name:glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
Gene_symbol:GNE
Gene_synonyms:Uae1
Gene_source:HGNC:23657



Transcript annotation


Transcript_name:ENST00000539208.5 uc011lpl.4 AK295562
Distance:16
Num_trans:11
All_trans:ENST00000539208.5:16 uc011lpl.4:16 AK295562:16 ENST00000377902.5:-28 NM_001190384:-28 NM_005476:-28 NM_001190383:-28 uc010mlh.5:-28 BC121179:57 ENST00000447283.6:132 uc010mlg.5:132



TATA-Box annotation


Distance to TSS:33
Nearest PromoterID:NM_001190383
Entrez ID:10020
Nearest Unigene:Hs.5920
Nearest Refseq:NM_005476
Nearest Ensembl:ENSG00000159921
Gene Name:glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
Gene Alias:DMRV
Gene Description:glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
Gene Type:protein-coding
CpG%:0.15
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):