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Difference between revisions of "TSS:Hg 100698.1"

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Line 6: Line 6:
 
|distance_to_tss=-85231
 
|distance_to_tss=-85231
 
|end=36487677
 
|end=36487677
 +
|end_of_center_position=36487632
 
|entrez_id=9833
 
|entrez_id=9833
 
|gc_percent=0.825871
 
|gc_percent=0.825871
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=36487585
 
|start=36487585
 +
|start_of_center_position=36487631
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000488058.1 uc064tau.1
 
|transcript_name=ENST00000488058.1 uc064tau.1

Revision as of 06:54, 11 May 2019

Basic information about the TSS


TSS ID:hg_100698.1
Species:human
Chr:chr9
TSS Classification:yes
Start:36487585
End:36487677
Strand:-
TSS Score:1
Start of the center position in the TSS region:36487631
End of the center position in the TSS region:36487632



Gene and protein annotation


Transcript_name:ENST00000488058.1 uc064tau.1
Distance:38
GeneID:152006
HGNC/MGI_ID:HGNC:18052
UniProt_ID:
Gene_name:ring finger protein 38
Gene_symbol:RNF38
Gene_synonyms:
Gene_source:HGNC:18052



Transcript annotation


Transcript_name:ENST00000488058.1 uc064tau.1
Distance:38
Num_trans:2
All_trans:ENST00000488058.1:38 uc064tau.1:38



TATA-Box annotation


Distance to TSS:-85231
Nearest PromoterID:NM_001256687
Entrez ID:9833
Nearest Unigene:Hs.184339
Nearest Refseq:NM_014791
Nearest Ensembl:ENSG00000165304
Gene Name:ring finger protein 38
Gene Alias:HPK38
Gene Description:maternal embryonic leucine zipper kinase
Gene Type:protein-coding
CpG%:0.175
GC%:0.825871
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):