Difference between revisions of "TSS:Mm 10036.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000125391.1:88 BC060251:-115 NM_198247:-146 uc007eds.2:-146 ENSMUST00000155579.7:-150 |chr=chr1 |cpg_percent=0.135 |distance=88 |distance_to_ts...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C130018M11Rik= | ||
|all_trans=ENSMUST00000125391.1:88 BC060251:-115 NM_198247:-146 uc007eds.2:-146 ENSMUST00000155579.7:-150 | |all_trans=ENSMUST00000125391.1:88 BC060251:-115 NM_198247:-146 uc007eds.2:-146 ENSMUST00000155579.7:-150 | ||
|chr=chr1 | |chr=chr1 | ||
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|distance_to_tss=162 | |distance_to_tss=162 | ||
|end=192855606 | |end=192855606 | ||
| + | |end_of_center_position=192855590 | ||
|entrez_id=214791 | |entrez_id=214791 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=4833404A09 | + | |gene_alias=4833404A09 |
|gene_description=SERTA domain containing 4 | |gene_description=SERTA domain containing 4 | ||
|gene_id=214791 | |gene_id=214791 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=192855573 | |start=192855573 | ||
| + | |start_of_center_position=192855589 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000125391.1 | |transcript_name=ENSMUST00000125391.1 | ||
Revision as of 07:32, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 192855589 |
|---|---|
| End of the center position in the TSS region: | 192855590 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000125391.1 |
|---|---|
| Distance: | 88 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000125391.1:88 BC060251:-115 NM_198247:-146 uc007eds.2:-146 ENSMUST00000155579.7:-150 |
TATA-Box annotation
| Distance to TSS: | 162 |
|---|---|
| Nearest PromoterID: | NM_198247 |
| Entrez ID: | 214791 |
| Nearest Unigene: | Mm.22806 |
| Nearest Refseq: | NM_198247 |
| Nearest Ensembl: | ENSMUSG00000016262 |
| Gene Name: | SERTA domain containing 4 |
| Gene Alias: | 4833404A09 |
| Gene Description: | SERTA domain containing 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
