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Difference between revisions of "TSS:Hg 100885.1"

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Line 8: Line 8:
 
|distance_to_tss=42
 
|distance_to_tss=42
 
|end=70869021
 
|end=70869021
 +
|end_of_center_position=70869016
 
|entrez_id=80036
 
|entrez_id=80036
 
|gc_percent=0.447761
 
|gc_percent=0.447761
|gene_alias=GON-2|LTRPC3|MLSN2
+
|gene_alias=GON-2
 
|gene_description=transient receptor potential cation channel subfamily M member 3
 
|gene_description=transient receptor potential cation channel subfamily M member 3
 
|gene_id=80036
 
|gene_id=80036
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=70869010
 
|start=70869010
 +
|start_of_center_position=70869015
 
|strand=-
 
|strand=-
 
|transcript_name=BC067733
 
|transcript_name=BC067733

Revision as of 07:36, 11 May 2019

Basic information about the TSS


TSS ID:hg_100885.1
Species:human
Chr:chr9
TSS Classification:yes
Start:70869010
End:70869021
Strand:-
TSS Score:1
Start of the center position in the TSS region:70869015
End of the center position in the TSS region:70869016



Gene and protein annotation


Transcript_name:BC067733
Distance:0
GeneID:80036
HGNC/MGI_ID:HGNC:17992
UniProt_ID:Q6NW43
Gene_name:transient receptor potential cation channel subfamily M member 3
Gene_symbol:TRPM3
Gene_synonyms:GON-2 KIAA1616 LTRPC3
Gene_source:HGNC:17992



Transcript annotation


Transcript_name:BC067733
Distance:0
Num_trans:24
All_trans:BC067733:0 ENST00000396283.5:-2 uc064trm.1:-2 ENST00000361823.9:-8 uc004aig.4:-8 AF325212:-8 AK021788:-27 AK225732:-28 ENST00000377101.5:-31 uc004aie.4:-31 BC094699:-31 ENST00000377105.5:-37 ENST00000360823.6:-37 NM_206947:-37 NM_206946:-37 NM_206945:-37 NM_020952:-37 NM_206944:-37 NM_024971:-37 NM_206948:-37 NM_001007470:-37 uc004ahy.5:-37 uc004ahx.5:-37 BC142972:-52



TATA-Box annotation


Distance to TSS:42
Nearest PromoterID:NM_206946
Entrez ID:80036
Nearest Unigene:Hs.47288
Nearest Refseq:NM_020952
Nearest Ensembl:ENSG00000083067
Gene Name:transient receptor potential cation channel subfamily M member 3
Gene Alias:GON-2
Gene Description:transient receptor potential cation channel subfamily M member 3
Gene Type:protein-coding
CpG%:0.015
GC%:0.447761
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):