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Difference between revisions of "TSS:Hg 100893.1"

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Line 8: Line 8:
 
|distance_to_tss=175
 
|distance_to_tss=175
 
|end=71121431
 
|end=71121431
 +
|end_of_center_position=71121424
 
|entrez_id=80036
 
|entrez_id=80036
 
|gc_percent=0.532338
 
|gc_percent=0.532338
|gene_alias=GON-2|LTRPC3|MLSN2
+
|gene_alias=GON-2
 
|gene_description=transient receptor potential cation channel subfamily M member 3
 
|gene_description=transient receptor potential cation channel subfamily M member 3
 
|gene_id=80036
 
|gene_id=80036
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=71121415
 
|start=71121415
 +
|start_of_center_position=71121423
 
|strand=-
 
|strand=-
 
|transcript_name=AK308682
 
|transcript_name=AK308682

Revision as of 07:37, 11 May 2019

Basic information about the TSS


TSS ID:hg_100893.1
Species:human
Chr:chr9
TSS Classification:yes
Start:71121415
End:71121431
Strand:-
TSS Score:1
Start of the center position in the TSS region:71121423
End of the center position in the TSS region:71121424



Gene and protein annotation


Transcript_name:AK308682
Distance:0
GeneID:80036
HGNC/MGI_ID:HGNC:17992
UniProt_ID:
Gene_name:transient receptor potential cation channel subfamily M member 3
Gene_symbol:TRPM3
Gene_synonyms:GON-2 KIAA1616 LTRPC3
Gene_source:HGNC:17992



Transcript annotation


Transcript_name:AK308682
Distance:0
Num_trans:9
All_trans:AK308682:0 BC172350:62 ENST00000377110.7:-167 ENST00000377111.6:-167 NM_001007471:-167 uc004aid.5:-167 uc004aic.4:-167 AJ505026:-167 AJ505025:-167



TATA-Box annotation


Distance to TSS:175
Nearest PromoterID:NM_001007471
Entrez ID:80036
Nearest Unigene:Hs.47288
Nearest Refseq:NM_020952
Nearest Ensembl:ENSG00000083067
Gene Name:transient receptor potential cation channel subfamily M member 3
Gene Alias:GON-2
Gene Description:transient receptor potential cation channel subfamily M member 3
Gene Type:protein-coding
CpG%:0.015
GC%:0.532338
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):