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Difference between revisions of "TSS:Hg 100986.1"

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Line 14: Line 14:
 
|distance_to_tss=102
 
|distance_to_tss=102
 
|end=72953220
 
|end=72953220
 +
|end_of_center_position=72953216
 
|entrez_id=216
 
|entrez_id=216
 
|gc_percent=0.38806
 
|gc_percent=0.38806
|gene_alias=ALDC|ALDH-E1|ALDH1|ALDH11|HEL-9|HEL-S-53e|HEL12|PUMB1|RALDH1
+
|gene_alias=ALDC
 
|gene_description=aldehyde dehydrogenase 1 family member A1
 
|gene_description=aldehyde dehydrogenase 1 family member A1
 
|gene_id=216
 
|gene_id=216
Line 32: Line 33:
 
|species=human
 
|species=human
 
|start=72953210
 
|start=72953210
 +
|start_of_center_position=72953215
 
|strand=-
 
|strand=-
 
|transcript_name=NM_000689
 
|transcript_name=NM_000689

Revision as of 07:50, 11 May 2019

Basic information about the TSS


TSS ID:hg_100986.1
Species:human
Chr:chr9
TSS Classification:yes
Start:72953210
End:72953220
Strand:-
TSS Score:1
Start of the center position in the TSS region:72953215
End of the center position in the TSS region:72953216



Gene and protein annotation


Transcript_name:NM_000689
Distance:-97
GeneID:216
HGNC/MGI_ID:HGNC:402
UniProt_ID:V9HW83
Gene_name:aldehyde dehydrogenase 1 family member A1
Gene_symbol:ALDH1A1
Gene_synonyms:RALDH1
Gene_source:HGNC:402



Transcript annotation


Transcript_name:NM_000689
Distance:-97
Num_trans:24
All_trans:NM_000689:-97 ENST00000376939.5:155 uc064tsz.1:155 ENST00000297785.7:156 uc004ajd.4:156 FJ224286:158 AK302168:158 AK026641:167 AK000118:167 EU668318:167 AB209821:168 BC001505:186 AF003341:211 AY390731:211 EU794589:211 BT006921:211 DQ890669:211 DQ893850:211 AB587538:211 KJ890654:212 ENST00000493113.1:244 uc064ttd.1:244 ENST00000482210.5:249 uc064tta.1:249



TATA-Box annotation


Distance to TSS:102
Nearest PromoterID:NM_000689
Entrez ID:216
Nearest Unigene:Hs.76392
Nearest Refseq:NM_000689
Nearest Ensembl:ENSG00000165092
Gene Name:aldehyde dehydrogenase 1 family member A1
Gene Alias:ALDC
Gene Description:aldehyde dehydrogenase 1 family member A1
Gene Type:protein-coding
CpG%:0.025
GC%:0.38806
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):