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Difference between revisions of "TSS:Hg 101150.1"

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Line 6: Line 6:
 
|distance_to_tss=119
 
|distance_to_tss=119
 
|end=83707991
 
|end=83707991
 +
|end_of_center_position=83707954
 
|entrez_id=105376114
 
|entrez_id=105376114
 
|gc_percent=0.746269
 
|gc_percent=0.746269
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=83707916
 
|start=83707916
 +
|start_of_center_position=83707953
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000257468.11 uc004amw.4 BC039294 AK027576 AL136643 BC010066 AK027556 BC017289
 
|transcript_name=ENST00000257468.11 uc004amw.4 BC039294 AK027576 AL136643 BC010066 AK027556 BC017289

Revision as of 08:24, 11 May 2019

Basic information about the TSS


TSS ID:hg_101150.1
Species:human
Chr:chr9
TSS Classification:yes
Start:83707916
End:83707991
Strand:-
TSS Score:1
Start of the center position in the TSS region:83707953
End of the center position in the TSS region:83707954



Gene and protein annotation


Transcript_name:ENST00000257468.11 uc004amw.4 BC039294 AK027576 AL136643 BC010066 AK027556 BC017289
Distance:0
GeneID:29979
HGNC/MGI_ID:HGNC:12508
UniProt_ID:A0A024R258 B3KNI2 B3KNI8 Q9UMX0
Gene_name:ubiquilin 1
Gene_symbol:UBQLN1
Gene_synonyms:DA41 DSK2 PLIC-1 XDRP1
Gene_source:HGNC:12508



Transcript annotation


Transcript_name:ENST00000257468.11 uc004amw.4 BC039294 AK027576 AL136643 BC010066 AK027556 BC017289
Distance:0
Num_trans:19
All_trans:ENST00000257468.11:0 uc004amw.4:0 BC039294:0 AK027576:0 AL136643:0 BC010066:0 AK027556:0 BC017289:0 AB035275:129 ENST00000376395.8:-212 uc004amv.4:-212 AK074535:-212 AB528730:235 AF176069:238 AF293384:238 NM_013438:-262 NM_053067:-262 ENST00000529923.1:316 uc064tze.1:316



TATA-Box annotation


Distance to TSS:119
Nearest PromoterID:NR_135839
Entrez ID:105376114
Nearest Unigene:Hs.9589
Nearest Refseq:NR_135839
Nearest Ensembl:ENSG00000254473
Gene Name:ubiquilin 1
Gene Alias:-
Gene Description:uncharacterized LOC105376114
Gene Type:ncRNA
CpG%:0.15
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):