Difference between revisions of "TSS:Hg 101256.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=538 | |distance_to_tss=538 | ||
|end=87974260 | |end=87974260 | ||
| + | |end_of_center_position=87974242 | ||
|entrez_id=23552 | |entrez_id=23552 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=CCRK | + | |gene_alias=CCRK |
|gene_description=cyclin dependent kinase 20 | |gene_description=cyclin dependent kinase 20 | ||
|gene_id=23552 | |gene_id=23552 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=87974223 | |start=87974223 | ||
| + | |start_of_center_position=87974241 | ||
|strand=- | |strand=- | ||
|tata_box="-29(GTTTTTAAAACC,+,0.00)" | |tata_box="-29(GTTTTTAAAACC,+,0.00)" | ||
Revision as of 08:52, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 87974241 |
|---|---|
| End of the center position in the TSS region: | 87974242 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AY904367 KU178572 KU178573 KU178574 KU178575 KU178576 KU178577 |
|---|---|
| Distance: | -186 |
| Num_trans: | 37 |
| All_trans: | AY904367:-186 KU178572:-186 KU178573:-186 KU178574:-186 KU178575:-186 KU178576:-186 KU178577:-186 ENST00000375871.8:-227 uc004apu.4:-227 ENST00000605159.5:-245 uc022bjj.2:-245 BC002655:-245 AK298993:-263 ENST00000604175.5:-271 ENST00000605591.1:-271 uc064udg.1:-271 uc064udh.1:-271 AK296328:-271 AK075325:-273 AK294193:-273 ENST00000603475.1:-274 uc064ude.1:-274 AK226135:-274 ENST00000336654.9:-329 uc004apt.4:-329 AF035013:-419 ENST00000459720.5:-425 uc064udd.1:-425 AF113130:-425 ENST00000486228.7:-441 uc064udf.1:-441 AK291713:-441 BX647489:-449 ENST00000325303.8:-492 uc004apr.4:-492 ENST00000375883.7:-493 uc004aps.4:-493 |
TATA-Box annotation
| Distance to TSS: | 538 |
|---|---|
| Nearest PromoterID: | NM_001039803 |
| Entrez ID: | 23552 |
| Nearest Unigene: | Hs.522274 |
| Nearest Refseq: | NM_012119 |
| Nearest Ensembl: | ENSG00000156345 |
| Gene Name: | cyclin-dependent kinase 20 |
| Gene Alias: | CCRK |
| Gene Description: | cyclin dependent kinase 20 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-29(GTTTTTAAAACC,+,0.00)" |
