Difference between revisions of "TSS:Hg 101283.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=-338 | |distance_to_tss=-338 | ||
|end=89179137 | |end=89179137 | ||
| + | |end_of_center_position=89179105 | ||
|entrez_id=53358 | |entrez_id=53358 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=N-Shc | + | |gene_alias=N-Shc |
|gene_description=SHC adaptor protein 3 | |gene_description=SHC adaptor protein 3 | ||
|gene_id=53358 | |gene_id=53358 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=89179072 | |start=89179072 | ||
| + | |start_of_center_position=89179104 | ||
|strand=- | |strand=- | ||
|tata_box="-47(TCTTAAAAAGCC,+,0.00)" | |tata_box="-47(TCTTAAAAAGCC,+,0.00)" | ||
Revision as of 08:58, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 89179104 |
|---|---|
| End of the center position in the TSS region: | 89179105 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375835.8 NM_016848 uc004aqf.2 BC026314 |
|---|---|
| Distance: | 306 |
| Num_trans: | 5 |
| All_trans: | ENST00000375835.8:306 NM_016848:306 uc004aqf.2:306 BC026314:306 D84361:433 |
TATA-Box annotation
| Distance to TSS: | -338 |
|---|---|
| Nearest PromoterID: | NM_016848 |
| Entrez ID: | 53358 |
| Nearest Unigene: | Hs.292737 |
| Nearest Refseq: | NM_016848 |
| Nearest Ensembl: | ENSG00000148082 |
| Gene Name: | SHC (Src homology 2 domain containing) transforming protein 3 |
| Gene Alias: | N-Shc |
| Gene Description: | SHC adaptor protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-47(TCTTAAAAAGCC,+,0.00)" |
