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Difference between revisions of "TSS:Hg 101314.1"

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Line 10: Line 10:
 
|distance_to_tss=73691
 
|distance_to_tss=73691
 
|end=89406029
 
|end=89406029
 +
|end_of_center_position=89406006
 
|entrez_id=10507
 
|entrez_id=10507
 
|gc_percent=0.567164
 
|gc_percent=0.567164
|gene_alias=C9orf164|CD100|M-sema-G|SEMAJ|coll-4
+
|gene_alias=C9orf164
 
|gene_description=semaphorin 4D
 
|gene_description=semaphorin 4D
 
|gene_id=10507
 
|gene_id=10507
Line 28: Line 29:
 
|species=human
 
|species=human
 
|start=89405981
 
|start=89405981
 +
|start_of_center_position=89406005
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000433650.5 uc064uew.1
 
|transcript_name=ENST00000433650.5 uc064uew.1

Revision as of 09:01, 11 May 2019

Basic information about the TSS


TSS ID:hg_101314.1
Species:human
Chr:chr9
TSS Classification:yes
Start:89405981
End:89406029
Strand:-
TSS Score:1
Start of the center position in the TSS region:89406005
End of the center position in the TSS region:89406006



Gene and protein annotation


Transcript_name:ENST00000433650.5 uc064uew.1
Distance:56
GeneID:10507
HGNC/MGI_ID:HGNC:10732
UniProt_ID:C9JYS7
Gene_name:semaphorin 4D
Gene_symbol:SEMA4D
Gene_synonyms:CD100 FLJ39737 coll-4
Gene_source:HGNC:10732



Transcript annotation


Transcript_name:ENST00000433650.5 uc064uew.1
Distance:56
Num_trans:3
All_trans:ENST00000433650.5:56 uc064uew.1:56 U60800:439



TATA-Box annotation


Distance to TSS:73691
Nearest PromoterID:NM_006378
Entrez ID:10507
Nearest Unigene:Hs.494406
Nearest Refseq:NM_006378
Nearest Ensembl:ENSG00000187764
Gene Name:semaphorin 4D
Gene Alias:C9orf164
Gene Description:semaphorin 4D
Gene Type:protein-coding
CpG%:0.02
GC%:0.567164
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):