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Difference between revisions of "TSS:Hg 101425.1"

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Line 8: Line 8:
 
|distance_to_tss=44
 
|distance_to_tss=44
 
|end=92404661
 
|end=92404661
 +
|end_of_center_position=92404655
 
|entrez_id=4969
 
|entrez_id=4969
 
|gc_percent=0.422886
 
|gc_percent=0.422886
|gene_alias=OG|OIF|SLRR3A
+
|gene_alias=OG
 
|gene_description=osteoglycin
 
|gene_description=osteoglycin
 
|gene_id=4969
 
|gene_id=4969
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=92404648
 
|start=92404648
 +
|start_of_center_position=92404654
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000447356.1 uc064uiq.1 AK289628
 
|transcript_name=ENST00000447356.1 uc064uiq.1 AK289628

Revision as of 09:19, 11 May 2019

Basic information about the TSS


TSS ID:hg_101425.1
Species:human
Chr:chr9
TSS Classification:yes
Start:92404648
End:92404661
Strand:-
TSS Score:1
Start of the center position in the TSS region:92404654
End of the center position in the TSS region:92404655



Gene and protein annotation


Transcript_name:ENST00000447356.1 uc064uiq.1 AK289628
Distance:-35
GeneID:4969
HGNC/MGI_ID:HGNC:8126
UniProt_ID:Q5TBF5
Gene_name:osteoglycin
Gene_symbol:OGN
Gene_synonyms:OIF SLRR3A mimecan
Gene_source:HGNC:8126



Transcript annotation


Transcript_name:ENST00000447356.1 uc064uiq.1 AK289628
Distance:-35
Num_trans:13
All_trans:ENST00000447356.1:-35 uc064uiq.1:-35 AK289628:-35 ENST00000375561.9:36 uc004asa.4:36 NM_024416:-38 NM_033014:-38 NM_014057:-38 AK295433:-38 ENST00000262551.8:90 uc004asb.4:90 AF086912:103 AF100758:103



TATA-Box annotation


Distance to TSS:44
Nearest PromoterID:NM_014057
Entrez ID:4969
Nearest Unigene:Hs.109439
Nearest Refseq:NM_014057
Nearest Ensembl:ENSG00000106809
Gene Name:osteoglycin
Gene Alias:OG
Gene Description:osteoglycin
Gene Type:protein-coding
CpG%:0
GC%:0.422886
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):