Difference between revisions of "TSS:Hg 243390.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC077732:27 |chr=chr9 |cpg_percent=0.005 |distance=27 |distance_to_tss=33437 |end=113184395 |entrez_id=1318 |gc_percent=0.368159 |gene_alias=COPT2|CTR2|...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |CTR2= | ||
|all_trans=BC077732:27 | |all_trans=BC077732:27 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=33437 | |distance_to_tss=33437 | ||
|end=113184395 | |end=113184395 | ||
| + | |end_of_center_position=94639635 | ||
|entrez_id=1318 | |entrez_id=1318 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| − | |gene_alias=COPT2 | + | |gene_alias=COPT2 |
|gene_description=solute carrier family 31 member 2 | |gene_description=solute carrier family 31 member 2 | ||
|gene_id=23307 | |gene_id=23307 | ||
| Line 16: | Line 18: | ||
|gene_synonyms=FKBP133 PPP1R76 WAFL | |gene_synonyms=FKBP133 PPP1R76 WAFL | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCTR2= | ||
|hgnc_mgi_id=HGNC:23397 | |hgnc_mgi_id=HGNC:23397 | ||
|nearest_ensembl=ENSG00000136867 | |nearest_ensembl=ENSG00000136867 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=113184394 | |start=113184394 | ||
| + | |start_of_center_position=94639634 | ||
|strand=- | |strand=- | ||
|transcript_name=BC077732 | |transcript_name=BC077732 | ||
Revision as of 09:40, 11 May 2019
Basic information about the TSS
|
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| Start of the center position in the TSS region: | 94639634 |
|---|---|
| End of the center position in the TSS region: | 94639635 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC077732 |
|---|---|
| Distance: | 27 |
| Num_trans: | 1 |
| All_trans: | BC077732:27 |
TATA-Box annotation
| Distance to TSS: | 33437 |
|---|---|
| Nearest PromoterID: | NM_001860 |
| Entrez ID: | 1318 |
| Nearest Unigene: | Hs.24030 |
| Nearest Refseq: | NM_001860 |
| Nearest Ensembl: | ENSG00000136867 |
| Gene Name: | FK506 binding protein 15 |
| Gene Alias: | COPT2 |
| Gene Description: | solute carrier family 31 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
