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Difference between revisions of "TSS:Hg 101702.1"

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Line 9: Line 9:
 
|distance_to_tss=107
 
|distance_to_tss=107
 
|end=98796449
 
|end=98796449
 +
|end_of_center_position=98796435
 
|entrez_id=203286
 
|entrez_id=203286
 
|gc_percent=0.850746
 
|gc_percent=0.850746
|gene_alias=ANKRD14|NPHP16|PKDR1|SAMD6
+
|gene_alias=ANKRD14
 
|gene_description=ankyrin repeat and sterile alpha motif domain containing 6
 
|gene_description=ankyrin repeat and sterile alpha motif domain containing 6
 
|gene_id=203286
 
|gene_id=203286
Line 27: Line 28:
 
|species=human
 
|species=human
 
|start=98796420
 
|start=98796420
 +
|start_of_center_position=98796434
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000353234.4 ENST00000471846.1 uc004ayu.4 uc064use.1
 
|transcript_name=ENST00000353234.4 ENST00000471846.1 uc004ayu.4 uc064use.1

Revision as of 10:11, 11 May 2019

Basic information about the TSS


TSS ID:hg_101702.1
Species:human
Chr:chr9
TSS Classification:yes
Start:98796420
End:98796449
Strand:-
TSS Score:1
Start of the center position in the TSS region:98796434
End of the center position in the TSS region:98796435



Gene and protein annotation


Transcript_name:ENST00000353234.4 ENST00000471846.1 uc004ayu.4 uc064use.1
Distance:-90
GeneID:203286
HGNC/MGI_ID:HGNC:26724
UniProt_ID:Q68DC2
Gene_name:ankyrin repeat and sterile alpha motif domain containing 6
Gene_symbol:ANKS6
Gene_synonyms:FLJ36928 NPHP16
Gene_source:HGNC:26724



Transcript annotation


Transcript_name:ENST00000353234.4 ENST00000471846.1 uc004ayu.4 uc064use.1
Distance:-90
Num_trans:7
All_trans:ENST00000353234.4:-90 ENST00000471846.1:-90 uc004ayu.4:-90 uc064use.1:-90 NM_173551:-93 CR749467:208 ENST00000634393.1:425



TATA-Box annotation


Distance to TSS:107
Nearest PromoterID:NM_173551
Entrez ID:203286
Nearest Unigene:Hs.406890
Nearest Refseq:NM_173551
Nearest Ensembl:ENSG00000165138
Gene Name:ankyrin repeat and sterile alpha motif domain containing 6
Gene Alias:ANKRD14
Gene Description:ankyrin repeat and sterile alpha motif domain containing 6
Gene Type:protein-coding
CpG%:0.195
GC%:0.850746
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):