Difference between revisions of "TSS:Hg 101905.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=406 | |distance_to_tss=406 | ||
|end=109497941 | |end=109497941 | ||
| + | |end_of_center_position=109497907 | ||
|entrez_id=5774 | |entrez_id=5774 | ||
|gc_percent=0.855721 | |gc_percent=0.855721 | ||
| − | |gene_alias=PTP-H1 | + | |gene_alias=PTP-H1 |
|gene_description="protein tyrosine phosphatase, non-receptor type 3" | |gene_description="protein tyrosine phosphatase, non-receptor type 3" | ||
|gene_id=5774 | |gene_id=5774 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=109497872 | |start=109497872 | ||
| + | |start_of_center_position=109497906 | ||
|strand=- | |strand=- | ||
|transcript_name=BC063287 | |transcript_name=BC063287 | ||
Revision as of 11:03, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 109497906 |
|---|---|
| End of the center position in the TSS region: | 109497907 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC063287 |
|---|---|
| Distance: | -345 |
| Num_trans: | 10 |
| All_trans: | BC063287:-345 ENST00000374541.3:-365 uc004bed.3:-365 AK295875:-367 ENST00000262539.7:-372 NM_001145368:-372 NM_002829:-372 uc010mtu.3:-372 AK316066:-372 AK304434:-372 |
TATA-Box annotation
| Distance to TSS: | 406 |
|---|---|
| Nearest PromoterID: | NM_002829 |
| Entrez ID: | 5774 |
| Nearest Unigene: | Hs.436429 |
| Nearest Refseq: | NM_002829 |
| Nearest Ensembl: | ENSG00000070159 |
| Gene Name: | "protein tyrosine phosphatase, non-receptor type 3" |
| Gene Alias: | PTP-H1 |
| Gene Description: | "protein tyrosine phosphatase, non-receptor type 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.855721 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
