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Difference between revisions of "TSS:Hg 101965.1"

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Line 12: Line 12:
 
|edg-2=
 
|edg-2=
 
|end=111038021
 
|end=111038021
 +
|end_of_center_position=111038015
 
|entrez_id=1902
 
|entrez_id=1902
 
|gc_percent=0.761194
 
|gc_percent=0.761194
|gene_alias=EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1
+
|gene_alias=EDG2
 
|gene_description=lysophosphatidic acid receptor 1
 
|gene_description=lysophosphatidic acid receptor 1
 
|gene_id=1902
 
|gene_id=1902
Line 31: Line 32:
 
|species=human
 
|species=human
 
|start=111038008
 
|start=111038008
 +
|start_of_center_position=111038014
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000374431.7 uc004bfb.4 BC036034
 
|transcript_name=ENST00000374431.7 uc004bfb.4 BC036034

Revision as of 11:16, 11 May 2019

Basic information about the TSS


TSS ID:hg_101965.1
Species:human
Chr:chr9
TSS Classification:yes
Start:111038008
End:111038021
Strand:-
TSS Score:1
Start of the center position in the TSS region:111038014
End of the center position in the TSS region:111038015



Gene and protein annotation


Transcript_name:ENST00000374431.7 uc004bfb.4 BC036034
Distance:-22
GeneID:1902
HGNC/MGI_ID:HGNC:3166
UniProt_ID:Q5VZX0 Q92633
Gene_name:lysophosphatidic acid receptor 1
Gene_symbol:LPAR1
Gene_synonyms:GPR26 Gpcr26 LPA1 Mrec1.3 edg-2 rec.1.3 vzg-1
Gene_source:HGNC:3166



Transcript annotation


Transcript_name:ENST00000374431.7 uc004bfb.4 BC036034
Distance:-22
Num_trans:11
All_trans:ENST00000374431.7:-22 uc004bfb.4:-22 BC036034:-22 AK299279:45 ENST00000358883.8:-64 NM_001401:-64 NM_057159:-64 uc004bfc.4:-64 AK022808:-64 ENST00000441240.1:-437 uc064vaq.1:-437



TATA-Box annotation


Distance to TSS:70
Nearest PromoterID:NM_001401
Entrez ID:1902
Nearest Unigene:Hs.126667
Nearest Refseq:NM_001401
Nearest Ensembl:ENSG00000198121
Gene Name:lysophosphatidic acid receptor 1
Gene Alias:EDG2
Gene Description:lysophosphatidic acid receptor 1
Gene Type:protein-coding
CpG%:0.14
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):