Difference between revisions of "TSS:Hg 102021.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=19 | |distance_to_tss=19 | ||
|end=111599439 | |end=111599439 | ||
| + | |end_of_center_position=111599413 | ||
|entrez_id=22949 | |entrez_id=22949 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=LTB4DH | + | |gene_alias=LTB4DH |
|gene_description=prostaglandin reductase 1 | |gene_description=prostaglandin reductase 1 | ||
|gene_id=22949 | |gene_id=22949 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=111599385 | |start=111599385 | ||
| + | |start_of_center_position=111599412 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000309195.9 ENST00000374308.1 NM_012212 uc004bfh.3 uc064vbe.1 BC035228 | |transcript_name=ENST00000309195.9 ENST00000374308.1 NM_012212 uc004bfh.3 uc064vbe.1 BC035228 | ||
Revision as of 11:22, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 111599412 |
|---|---|
| End of the center position in the TSS region: | 111599413 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000309195.9 ENST00000374308.1 NM_012212 uc004bfh.3 uc064vbe.1 BC035228 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000309195.9:0 ENST00000374308.1:0 NM_012212:0 uc004bfh.3:0 uc064vbe.1:0 BC035228:0 D49387:-186 AK091948:-206 AK309450:-208 ENST00000422125.1:-256 uc064vbc.1:-256 ENST00000374313.5:-377 uc064vbd.1:-377 AK309866:-382 AK298379:-396 ENST00000538962.5:-416 ENST00000407693.6:-416 NM_001146109:-416 NM_001146108:-416 uc011lwr.2:-416 uc004bfi.3:-416 AK289597:-416 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_012212 |
| Entrez ID: | 22949 |
| Nearest Unigene: | Hs.584864 |
| Nearest Refseq: | NM_012212 |
| Nearest Ensembl: | ENSG00000106853 |
| Gene Name: | prostaglandin reductase 1 |
| Gene Alias: | LTB4DH |
| Gene Description: | prostaglandin reductase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
