Difference between revisions of "TSS:Hg 102111.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=1 | |distance_to_tss=1 | ||
|end=113410682 | |end=113410682 | ||
| + | |end_of_center_position=113410675 | ||
|entrez_id=54107 | |entrez_id=54107 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=CHARAC17 | + | |gene_alias=CHARAC17 |
|gene_description="DNA polymerase epsilon 3, accessory subunit" | |gene_description="DNA polymerase epsilon 3, accessory subunit" | ||
|gene_id=54107 | |gene_id=54107 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=113410666 | |start=113410666 | ||
| + | |start_of_center_position=113410674 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000374171.4 NR_027261 uc004bhn.4 AK074762 | |transcript_name=ENST00000374171.4 NR_027261 uc004bhn.4 AK074762 | ||
Revision as of 11:40, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 113410674 |
|---|---|
| End of the center position in the TSS region: | 113410675 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000374171.4 NR_027261 uc004bhn.4 AK074762 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000374171.4:0 NR_027261:0 uc004bhn.4:0 AK074762:0 NM_017443:-67 NM_001278255:-67 ENST00000374169.7:285 uc011lxg.3:285 AK074629:285 AK096050:290 AK074782:293 BC003166:303 BC004170:303 ENST00000475080.1:317 uc064vei.1:317 ENST00000479871.1:324 uc064veh.1:324 AK092840:324 AF226077:374 AY720898:374 JF432738:374 KJ894010:374 AB527738:374 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NR_027261 |
| Entrez ID: | 54107 |
| Nearest Unigene: | Hs.108112 |
| Nearest Refseq: | NM_017443 |
| Nearest Ensembl: | ENSG00000148229 |
| Gene Name: | "polymerase (DNA) epsilon 3, accessory subunit" |
| Gene Alias: | CHARAC17 |
| Gene Description: | "DNA polymerase epsilon 3, accessory subunit" |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
