Difference between revisions of "TSS:Hg 231576.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |DFNA56= | ||
| + | |GMEM= | ||
| + | |GP= | ||
| + | |HXB= | ||
| + | |JI= | ||
| + | |TN= | ||
| + | |TN-C= | ||
|all_trans=AB210038:-45 AK304015:-65 X78565:-72 ENST00000534839.1:-111 uc064vgz.1:-111 ENST00000535648.5:-169 ENST00000350763.8:-169 NM_002160:-169 uc022bmj.2:-169 uc004bjj.6:-169 | |all_trans=AB210038:-45 AK304015:-65 X78565:-72 ENST00000534839.1:-111 uc064vgz.1:-111 ENST00000535648.5:-169 ENST00000350763.8:-169 NM_002160:-169 uc022bmj.2:-169 uc004bjj.6:-169 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 13: | ||
|distance_to_tss=174 | |distance_to_tss=174 | ||
|end=115118088 | |end=115118088 | ||
| + | |end_of_center_position=115118083 | ||
|entrez_id=3371 | |entrez_id=3371 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=150-225 | + | |gene_alias=150-225 |
|gene_description=tenascin C | |gene_description=tenascin C | ||
|gene_id=3371 | |gene_id=3371 | ||
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|species=human | |species=human | ||
|start=115118077 | |start=115118077 | ||
| + | |start_of_center_position=115118082 | ||
|strand=- | |strand=- | ||
|transcript_name=AB210038 | |transcript_name=AB210038 | ||
Revision as of 12:03, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115118082 |
|---|---|
| End of the center position in the TSS region: | 115118083 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB210038 |
|---|---|
| Distance: | -45 |
| Num_trans: | 10 |
| All_trans: | AB210038:-45 AK304015:-65 X78565:-72 ENST00000534839.1:-111 uc064vgz.1:-111 ENST00000535648.5:-169 ENST00000350763.8:-169 NM_002160:-169 uc022bmj.2:-169 uc004bjj.6:-169 |
TATA-Box annotation
| Distance to TSS: | 174 |
|---|---|
| Nearest PromoterID: | NM_002160 |
| Entrez ID: | 3371 |
| Nearest Unigene: | Hs.143250 |
| Nearest Refseq: | NM_002160 |
| Nearest Ensembl: | ENSG00000041982 |
| Gene Name: | tenascin C |
| Gene Alias: | 150-225 |
| Gene Description: | tenascin C |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
