Difference between revisions of "TSS:Hg 102388.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=51 | |distance_to_tss=51 | ||
|end=122227545 | |end=122227545 | ||
| + | |end_of_center_position=122227536 | ||
|entrez_id=26468 | |entrez_id=26468 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=122227525 | |start=122227525 | ||
| + | |start_of_center_position=122227535 | ||
|strand=- | |strand=- | ||
|tata_box="-86(GGCTTTAAATGC,-,0.00),-84(CTTTAAATGCCC,+,0.00)" | |tata_box="-86(GGCTTTAAATGC,-,0.00),-84(CTTTAAATGCCC,+,0.00)" | ||
Revision as of 12:37, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 122227535 |
|---|---|
| End of the center position in the TSS region: | 122227536 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK313808 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | AK313808:0 ENST00000373755.6:-41 ENST00000373754.6:-41 NM_001242334:-41 uc010mvw.3:-41 uc064vmd.1:-41 AK289827:-41 AB031041:43 AB031042:43 EU446700:49 AM392697:49 AM393362:49 KJ902431:50 ENST00000560152.1:403 uc064vmh.1:403 |
TATA-Box annotation
| Distance to TSS: | 51 |
|---|---|
| Nearest PromoterID: | NM_001242334 |
| Entrez ID: | 26468 |
| Nearest Unigene: | Hs.103137 |
| Nearest Refseq: | NM_014368 |
| Nearest Ensembl: | ENSG00000106852 |
| Gene Name: | LIM homeobox 6 |
| Gene Alias: | LHX6.1 |
| Gene Description: | LIM homeobox 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-86(GGCTTTAAATGC,-,0.00),-84(CTTTAAATGCCC,+,0.00)" |
