Difference between revisions of "TSS:Hg 102389.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=7 | |distance_to_tss=7 | ||
|end=122228440 | |end=122228440 | ||
| + | |end_of_center_position=122228421 | ||
|entrez_id=26468 | |entrez_id=26468 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=122228401 | |start=122228401 | ||
| + | |start_of_center_position=122228420 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000541397.2 ENST00000560485.1 NM_001242333 uc022bmx.2 uc064vmi.1 AK297175 | |transcript_name=ENST00000541397.2 ENST00000560485.1 NM_001242333 uc022bmx.2 uc064vmi.1 AK297175 | ||
Revision as of 12:37, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 122228420 |
|---|---|
| End of the center position in the TSS region: | 122228421 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000541397.2 ENST00000560485.1 NM_001242333 uc022bmx.2 uc064vmi.1 AK297175 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENST00000541397.2:0 ENST00000560485.1:0 NM_001242333:0 uc022bmx.2:0 uc064vmi.1:0 AK297175:0 BC103936:-231 BC103937:-231 BC103938:-231 AL136570:-265 NM_199160:-372 NM_014368:-372 ENST00000394319.8:-405 uc004blx.5:-405 AK299709:-405 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_001242333 |
| Entrez ID: | 26468 |
| Nearest Unigene: | Hs.103137 |
| Nearest Refseq: | NM_014368 |
| Nearest Ensembl: | ENSG00000106852 |
| Gene Name: | LIM homeobox 6 |
| Gene Alias: | LHX6.1 |
| Gene Description: | LIM homeobox 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
