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Difference between revisions of "TSS:Hg 102541.1"

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Line 8: Line 8:
 
|distance_to_tss=53164
 
|distance_to_tss=53164
 
|end=127505434
 
|end=127505434
 +
|end_of_center_position=127505420
 
|entrez_id=90678
 
|entrez_id=90678
 
|gc_percent=0.492537
 
|gc_percent=0.492537
|gene_alias=CMT2P|RIFLE|TAL
+
|gene_alias=CMT2P
 
|gene_description=leucine rich repeat and sterile alpha motif containing 1
 
|gene_description=leucine rich repeat and sterile alpha motif containing 1
 
|gene_id=64855
 
|gene_id=64855
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=127505404
 
|start=127505404
 +
|start_of_center_position=127505419
 
|strand=-
 
|strand=-
 
|transcript_name=BC023210
 
|transcript_name=BC023210

Revision as of 13:09, 11 May 2019

Basic information about the TSS


TSS ID:hg_102541.1
Species:human
Chr:chr9
TSS Classification:yes
Start:127505404
End:127505434
Strand:-
TSS Score:1
Start of the center position in the TSS region:127505419
End of the center position in the TSS region:127505420



Gene and protein annotation


Transcript_name:BC023210
Distance:-170
GeneID:64855
HGNC/MGI_ID:HGNC:25282
UniProt_ID:
Gene_name:family with sequence similarity 129 member B
Gene_symbol:FAM129B
Gene_synonyms:DKFZP434H0820 FLJ13518 FLJ22151 FLJ22298 MINERVA bA356B19.6
Gene_source:HGNC:25282



Transcript annotation


Transcript_name:BC023210
Distance:-170
Num_trans:1
All_trans:BC023210:-170



TATA-Box annotation


Distance to TSS:53164
Nearest PromoterID:NM_001005374
Entrez ID:90678
Nearest Unigene:Hs.495188
Nearest Refseq:NM_138361
Nearest Ensembl:ENSG00000148356
Gene Name:family with sequence similarity 129 member B
Gene Alias:CMT2P
Gene Description:leucine rich repeat and sterile alpha motif containing 1
Gene Type:protein-coding
CpG%:0.025
GC%:0.492537
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):