Difference between revisions of "TSS:Mm 88380.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK015109:-45 |chr=chr10 |cpg_percent=0.095 |distance=-45 |distance_to_tss=491 |end=76442425 |entrez_id=18541 |gc_percent=0.61194 |gene_alias=AW476095|C8...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C86676= | ||
| + | |KEN= | ||
| + | |Pcnt2= | ||
|all_trans=AK015109:-45 | |all_trans=AK015109:-45 | ||
|chr=chr10 | |chr=chr10 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=491 | |distance_to_tss=491 | ||
|end=76442425 | |end=76442425 | ||
| + | |end_of_center_position=76442421 | ||
|entrez_id=18541 | |entrez_id=18541 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=AW476095 | + | |gene_alias=AW476095 |
|gene_description=pericentrin (kendrin) | |gene_description=pericentrin (kendrin) | ||
|gene_id=100036541 | |gene_id=100036541 | ||
| Line 17: | Line 21: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3642478 | |hgnc_mgi_id=MGI:3642478 | ||
| + | |kendrin= | ||
| + | |m239Asp= | ||
| + | |m275Asp= | ||
|nearest_ensembl=ENSMUSG00000001151 | |nearest_ensembl=ENSMUSG00000001151 | ||
|nearest_promoter_id=NM_008787 | |nearest_promoter_id=NM_008787 | ||
| Line 24: | Line 31: | ||
|species=mouse | |species=mouse | ||
|start=76442416 | |start=76442416 | ||
| + | |start_of_center_position=76442420 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK015109 | |transcript_name=AK015109 | ||
Revision as of 13:30, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 76442420 |
|---|---|
| End of the center position in the TSS region: | 76442421 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK015109 |
|---|---|
| Distance: | -45 |
| Num_trans: | 1 |
| All_trans: | AK015109:-45 |
TATA-Box annotation
| Distance to TSS: | 491 |
|---|---|
| Nearest PromoterID: | NM_008787 |
| Entrez ID: | 18541 |
| Nearest Unigene: | Mm.251794 |
| Nearest Refseq: | NM_008787 |
| Nearest Ensembl: | ENSMUSG00000001151 |
| Gene Name: | predicted gene 9744 |
| Gene Alias: | AW476095 |
| Gene Description: | pericentrin (kendrin) |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
