Difference between revisions of "TSS:Hg 231614.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000224140.5:31 NM_015046:31 uc004cbk.4:31 BX538166:31 BX537849:47 AK307608:47 AK125448:160 |chr=chr9 |cpg_percent=0.105 |distance=31 |distance_to_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AOA2= | ||
| + | |SCAR1= | ||
|all_trans=ENST00000224140.5:31 NM_015046:31 uc004cbk.4:31 BX538166:31 BX537849:47 AK307608:47 AK125448:160 | |all_trans=ENST00000224140.5:31 NM_015046:31 uc004cbk.4:31 BX538166:31 BX537849:47 AK307608:47 AK125448:160 | ||
| + | |bA479K20.2= | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-32 | |distance_to_tss=-32 | ||
|end=132355018 | |end=132355018 | ||
| + | |end_of_center_position=132355017 | ||
|entrez_id=23064 | |entrez_id=23064 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=ALS4 | + | |gene_alias=ALS4 |
|gene_description=senataxin | |gene_description=senataxin | ||
|gene_id=23064 | |gene_id=23064 | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=132355015 | |start=132355015 | ||
| + | |start_of_center_position=132355016 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000224140.5 NM_015046 uc004cbk.4 BX538166 | |transcript_name=ENST00000224140.5 NM_015046 uc004cbk.4 BX538166 | ||
Revision as of 14:33, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 132355016 |
|---|---|
| End of the center position in the TSS region: | 132355017 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000224140.5 NM_015046 uc004cbk.4 BX538166 |
|---|---|
| Distance: | 31 |
| Num_trans: | 7 |
| All_trans: | ENST00000224140.5:31 NM_015046:31 uc004cbk.4:31 BX538166:31 BX537849:47 AK307608:47 AK125448:160 |
TATA-Box annotation
| Distance to TSS: | -32 |
|---|---|
| Nearest PromoterID: | NM_015046 |
| Entrez ID: | 23064 |
| Nearest Unigene: | Hs.460317 |
| Nearest Refseq: | NM_015046 |
| Nearest Ensembl: | ENSG00000107290 |
| Gene Name: | senataxin |
| Gene Alias: | ALS4 |
| Gene Description: | senataxin |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
