Difference between revisions of "TSS:Hg 16395.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK123637:-47 ENST00000445957.2:-95 uc057oai.1:-95 |chr=chr1 |cpg_percent=0.03 |distance=-47 |distance_to_tss=1313 |end=190474706 |entrez_id=339479 |gc_p...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DBCCR1L1= | ||
| + | |FAM5C= | ||
|all_trans=AK123637:-47 ENST00000445957.2:-95 uc057oai.1:-95 | |all_trans=AK123637:-47 ENST00000445957.2:-95 uc057oai.1:-95 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=1313 | |distance_to_tss=1313 | ||
|end=190474706 | |end=190474706 | ||
| + | |end_of_center_position=190474698 | ||
|entrez_id=339479 | |entrez_id=339479 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=DBCCR1L | + | |gene_alias=DBCCR1L |
|gene_description=BMP/retinoic acid inducible neural specific 3 | |gene_description=BMP/retinoic acid inducible neural specific 3 | ||
|gene_id=339479 | |gene_id=339479 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=190474688 | |start=190474688 | ||
| + | |start_of_center_position=190474697 | ||
|strand=- | |strand=- | ||
|tata_box="-27(CCCTTTAGAGAA,+,0.00)" | |tata_box="-27(CCCTTTAGAGAA,+,0.00)" | ||
Revision as of 15:06, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 190474697 |
|---|---|
| End of the center position in the TSS region: | 190474698 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK123637 |
|---|---|
| Distance: | -47 |
| Num_trans: | 3 |
| All_trans: | AK123637:-47 ENST00000445957.2:-95 uc057oai.1:-95 |
TATA-Box annotation
| Distance to TSS: | 1313 |
|---|---|
| Nearest PromoterID: | NM_001317188 |
| Entrez ID: | 339479 |
| Nearest Unigene: | Hs.65765 |
| Nearest Refseq: | NM_199051 |
| Nearest Ensembl: | ENSG00000162670 |
| Gene Name: | BMP/retinoic acid inducible neural specific 3 |
| Gene Alias: | DBCCR1L |
| Gene Description: | BMP/retinoic acid inducible neural specific 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-27(CCCTTTAGAGAA,+,0.00)" |
