Difference between revisions of "TSS:Mm 89080.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000020488.7:0 NM_026579:0 uc007gkg.2:0 AK128995:0 AK049544:0 AK160350:0 AK147063:0 AK162255:0 AK020067:0 AB336210:0 AB336211:0 BC050904:0 BC094...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C430041I18Rik= | ||
|all_trans=ENSMUST00000020488.7:0 NM_026579:0 uc007gkg.2:0 AK128995:0 AK049544:0 AK160350:0 AK147063:0 AK162255:0 AK020067:0 AB336210:0 AB336211:0 BC050904:0 BC094241:0 BC035946:0 AK201856:21 AB336212:27 AB336213:83 | |all_trans=ENSMUST00000020488.7:0 NM_026579:0 uc007gkg.2:0 AK128995:0 AK049544:0 AK160350:0 AK147063:0 AK162255:0 AK020067:0 AB336210:0 AB336211:0 BC050904:0 BC094241:0 BC035946:0 AK201856:21 AB336212:27 AB336213:83 | ||
|chr=chr10 | |chr=chr10 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=14 | |distance_to_tss=14 | ||
|end=83360264 | |end=83360264 | ||
| + | |end_of_center_position=83360236 | ||
|entrez_id=28109 | |entrez_id=28109 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=AI747614 | + | |gene_alias=AI747614 |
|gene_description="DNA segment, Chr 10, Wayne State University 102, expressed" | |gene_description="DNA segment, Chr 10, Wayne State University 102, expressed" | ||
|gene_id=28109 | |gene_id=28109 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=83360206 | |start=83360206 | ||
| + | |start_of_center_position=83360235 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000020488.7 NM_026579 uc007gkg.2 AK128995 AK049544 AK160350 AK147063 AK162255 AK020067 AB336210 AB336211 BC050904 BC094241 BC035946 | |transcript_name=ENSMUST00000020488.7 NM_026579 uc007gkg.2 AK128995 AK049544 AK160350 AK147063 AK162255 AK020067 AB336210 AB336211 BC050904 BC094241 BC035946 | ||
Revision as of 15:30, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 83360235 |
|---|---|
| End of the center position in the TSS region: | 83360236 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000020488.7 NM_026579 uc007gkg.2 AK128995 AK049544 AK160350 AK147063 AK162255 AK020067 AB336210 AB336211 BC050904 BC094241 BC035946 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000020488.7:0 NM_026579:0 uc007gkg.2:0 AK128995:0 AK049544:0 AK160350:0 AK147063:0 AK162255:0 AK020067:0 AB336210:0 AB336211:0 BC050904:0 BC094241:0 BC035946:0 AK201856:21 AB336212:27 AB336213:83 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NM_026579 |
| Entrez ID: | 28109 |
| Nearest Unigene: | Mm.196210 |
| Nearest Refseq: | NM_026579 |
| Nearest Ensembl: | ENSMUSG00000020255 |
| Gene Name: | "DNA segment, Chr 10, Wayne State University 102, expressed" |
| Gene Alias: | AI747614 |
| Gene Description: | "DNA segment, Chr 10, Wayne State University 102, expressed" |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
