Difference between revisions of "TSS:Hg 243179.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000518221.5:57 uc064mqm.1:57 NM_182746:75 NM_005914:75 |chr=chr8 |cpg_percent=0.15 |distance=57 |distance_to_tss=64 |end=47960128 |entrez_id=5591...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DNAPK= | ||
| + | |DNPK1= | ||
| + | |HYRC= | ||
| + | |HYRC1= | ||
| + | |IMD26= | ||
| + | |XRCC7= | ||
|all_trans=ENST00000518221.5:57 uc064mqm.1:57 NM_182746:75 NM_005914:75 | |all_trans=ENST00000518221.5:57 uc064mqm.1:57 NM_182746:75 NM_005914:75 | ||
|chr=chr8 | |chr=chr8 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=64 | |distance_to_tss=64 | ||
|end=47960128 | |end=47960128 | ||
| + | |end_of_center_position=136477617 | ||
|entrez_id=5591 | |entrez_id=5591 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=DNA-PKcs | + | |gene_alias=DNA-PKcs |
|gene_description="protein kinase, DNA-activated, catalytic polypeptide" | |gene_description="protein kinase, DNA-activated, catalytic polypeptide" | ||
|gene_id=4173 | |gene_id=4173 | ||
| Line 22: | Line 29: | ||
|nearest_unigene=Hs.491682 | |nearest_unigene=Hs.491682 | ||
|num_trans=4 | |num_trans=4 | ||
| + | |p350= | ||
|species=human | |species=human | ||
|start=47960109 | |start=47960109 | ||
| + | |start_of_center_position=136477616 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000518221.5 uc064mqm.1 | |transcript_name=ENST00000518221.5 uc064mqm.1 | ||
Revision as of 15:38, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136477616 |
|---|---|
| End of the center position in the TSS region: | 136477617 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000518221.5 uc064mqm.1 |
|---|---|
| Distance: | 57 |
| Num_trans: | 4 |
| All_trans: | ENST00000518221.5:57 uc064mqm.1:57 NM_182746:75 NM_005914:75 |
TATA-Box annotation
| Distance to TSS: | 64 |
|---|---|
| Nearest PromoterID: | NM_006904 |
| Entrez ID: | 5591 |
| Nearest Unigene: | Hs.491682 |
| Nearest Refseq: | NM_006904 |
| Nearest Ensembl: | ENSG00000253729 |
| Gene Name: | minichromosome maintenance complex component 4 |
| Gene Alias: | DNA-PKcs |
| Gene Description: | "protein kinase, DNA-activated, catalytic polypeptide" |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
