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Difference between revisions of "TSS:Hg 103299.1"

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Line 10: Line 10:
 
|distance_to_tss=-343
 
|distance_to_tss=-343
 
|end=137046595
 
|end=137046595
 +
|end_of_center_position=137046567
 
|entrez_id=56654
 
|entrez_id=56654
 
|gc_percent=0.666667
 
|gc_percent=0.666667
|gene_alias=CAB|CAB-|CAB-1|CAB1|NPDC-1
+
|gene_alias=CAB
 
|gene_description="neural proliferation, differentiation and control 1"
 
|gene_description="neural proliferation, differentiation and control 1"
 
|gene_id=56654
 
|gene_id=56654
Line 28: Line 29:
 
|species=human
 
|species=human
 
|start=137046538
 
|start=137046538
 +
|start_of_center_position=137046566
 
|strand=-
 
|strand=-
 
|transcript_name=NM_015392
 
|transcript_name=NM_015392

Revision as of 16:04, 11 May 2019

Basic information about the TSS


TSS ID:hg_103299.1
Species:human
Chr:chr9
TSS Classification:yes
Start:137046538
End:137046595
Strand:-
TSS Score:1
Start of the center position in the TSS region:137046566
End of the center position in the TSS region:137046567



Gene and protein annotation


Transcript_name:NM_015392
Distance:315
GeneID:56654
HGNC/MGI_ID:HGNC:7899
UniProt_ID:Q9NQX5
Gene_name:"neural proliferation, differentiation and control, 1"
Gene_symbol:NPDC1
Gene_synonyms:CAB- CAB1 DKFZp586J0523
Gene_source:HGNC:7899



Transcript annotation


Transcript_name:NM_015392
Distance:315
Num_trans:12
All_trans:NM_015392:315 ENST00000371601.4:336 uc004ckt.3:336 AF285836:336 ENST00000485589.1:360 uc064xii.1:360 AK074793:362 AF327349:383 BC004217:431 AF272357:468 ENST00000488145.1:483 uc064xih.1:483



TATA-Box annotation


Distance to TSS:-343
Nearest PromoterID:NM_015392
Entrez ID:56654
Nearest Unigene:Hs.719906
Nearest Refseq:NM_015392
Nearest Ensembl:ENSG00000107281
Gene Name:"neural proliferation, differentiation and control, 1"
Gene Alias:CAB
Gene Description:"neural proliferation, differentiation and control 1"
Gene Type:protein-coding
CpG%:0.07
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):