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Difference between revisions of "TSS:Hg 103324.1"

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Line 7: Line 7:
 
|distance_to_tss=122
 
|distance_to_tss=122
 
|end=137169923
 
|end=137169923
 +
|end_of_center_position=137169918
 
|entrez_id=389816
 
|entrez_id=389816
 
|gc_percent=0.781095
 
|gc_percent=0.781095
|gene_alias=CAPC|bA350O14.10
+
|gene_alias=CAPC
 
|gene_description=leucine rich repeat containing 26
 
|gene_description=leucine rich repeat containing 26
 
|gene_id=389816
 
|gene_id=389816
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=137169911
 
|start=137169911
 +
|start_of_center_position=137169917
 
|strand=-
 
|strand=-
 
|transcript_name=DQ355157
 
|transcript_name=DQ355157

Revision as of 16:09, 11 May 2019

Basic information about the TSS


TSS ID:hg_103324.1
Species:human
Chr:chr9
TSS Classification:yes
Start:137169911
End:137169923
Strand:-
TSS Score:1
Start of the center position in the TSS region:137169917
End of the center position in the TSS region:137169918



Gene and protein annotation


Transcript_name:DQ355157
Distance:-52
GeneID:389816
HGNC/MGI_ID:HGNC:31409
UniProt_ID:
Gene_name:leucine rich repeat containing 26
Gene_symbol:LRRC26
Gene_synonyms:OTTHUMG00000020980 bA350O14.10
Gene_source:HGNC:31409



Transcript annotation


Transcript_name:DQ355157
Distance:-52
Num_trans:6
All_trans:DQ355157:-52 BC140911:-85 NM_001013653:-116 ENST00000371542.3:-128 uc004clp.4:-128 EU588721:482



TATA-Box annotation


Distance to TSS:122
Nearest PromoterID:NM_001013653
Entrez ID:389816
Nearest Unigene:Hs.669977
Nearest Refseq:NM_001013653
Nearest Ensembl:ENSG00000184709
Gene Name:leucine rich repeat containing 26
Gene Alias:CAPC
Gene Description:leucine rich repeat containing 26
Gene Type:protein-coding
CpG%:0.105
GC%:0.781095
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):