Difference between revisions of "TSS:Hg 16807.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=EU831608:-223 EU831695:-223 BT007223:-223 DQ890777:-223 KJ896598:-223 KJ896597:-223 DQ893937:-223 CU678995:-223 BC038354:-281 BC039132:-290 M80927:-294...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |CGP-39= | ||
| + | |GP-39= | ||
| + | |GP39= | ||
| + | |HC-gp39= | ||
| + | |HCGP-3P= | ||
| + | |YKL-40= | ||
| + | |YKL40= | ||
| + | |YYL-40= | ||
|all_trans=EU831608:-223 EU831695:-223 BT007223:-223 DQ890777:-223 KJ896598:-223 KJ896597:-223 DQ893937:-223 CU678995:-223 BC038354:-281 BC039132:-290 M80927:-294 AK225266:-303 AK225584:-303 AK130142:-304 AK130200:-304 BC008568:-340 ENST00000255409.7:-349 uc001gzi.3:-349 AK312911:-377 NM_001276:-394 | |all_trans=EU831608:-223 EU831695:-223 BT007223:-223 DQ890777:-223 KJ896598:-223 KJ896597:-223 DQ893937:-223 CU678995:-223 BC038354:-281 BC039132:-290 M80927:-294 AK225266:-303 AK225584:-303 AK130142:-304 AK130200:-304 BC008568:-340 ENST00000255409.7:-349 uc001gzi.3:-349 AK312911:-377 NM_001276:-394 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 14: | ||
|distance_to_tss=406 | |distance_to_tss=406 | ||
|end=203186400 | |end=203186400 | ||
| + | |end_of_center_position=203186388 | ||
|entrez_id=1116 | |entrez_id=1116 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=ASRT7 | + | |gene_alias=ASRT7 |
|gene_description=chitinase 3 like 1 | |gene_description=chitinase 3 like 1 | ||
|gene_id=1116 | |gene_id=1116 | ||
| Line 16: | Line 25: | ||
|gene_synonyms=GP39 YKL40 | |gene_synonyms=GP39 YKL40 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCGP-39= | ||
|hgnc_mgi_id=HGNC:1932 | |hgnc_mgi_id=HGNC:1932 | ||
|nearest_ensembl=ENSG00000133048 | |nearest_ensembl=ENSG00000133048 | ||
| Line 24: | Line 34: | ||
|species=human | |species=human | ||
|start=203186375 | |start=203186375 | ||
| + | |start_of_center_position=203186387 | ||
|strand=- | |strand=- | ||
|transcript_name=EU831608 EU831695 BT007223 DQ890777 KJ896598 KJ896597 DQ893937 CU678995 | |transcript_name=EU831608 EU831695 BT007223 DQ890777 KJ896598 KJ896597 DQ893937 CU678995 | ||
Revision as of 16:31, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 203186387 |
|---|---|
| End of the center position in the TSS region: | 203186388 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | EU831608 EU831695 BT007223 DQ890777 KJ896598 KJ896597 DQ893937 CU678995 |
|---|---|
| Distance: | -223 |
| Num_trans: | 20 |
| All_trans: | EU831608:-223 EU831695:-223 BT007223:-223 DQ890777:-223 KJ896598:-223 KJ896597:-223 DQ893937:-223 CU678995:-223 BC038354:-281 BC039132:-290 M80927:-294 AK225266:-303 AK225584:-303 AK130142:-304 AK130200:-304 BC008568:-340 ENST00000255409.7:-349 uc001gzi.3:-349 AK312911:-377 NM_001276:-394 |
TATA-Box annotation
| Distance to TSS: | 406 |
|---|---|
| Nearest PromoterID: | NM_001276 |
| Entrez ID: | 1116 |
| Nearest Unigene: | Hs.382202 |
| Nearest Refseq: | NM_001276 |
| Nearest Ensembl: | ENSG00000133048 |
| Gene Name: | chitinase 3 like 1 |
| Gene Alias: | ASRT7 |
| Gene Description: | chitinase 3 like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
