Difference between revisions of "TSS:Mm 100814.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000079949.12:58 ENSMUST00000063232.6:228 AK046434:228 NM_007968:236 NM_001283061:236 NM_001283062:236 NM_001283063:236 uc007hvw.2:236 uc007hvx....") |
|||
| Line 6: | Line 6: | ||
|distance_to_tss=67 | |distance_to_tss=67 | ||
|end=5099356 | |end=5099356 | ||
| + | |end_of_center_position=5099340 | ||
|entrez_id=279766 | |entrez_id=279766 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=5099323 | |start=5099323 | ||
| + | |start_of_center_position=5099339 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000079949.12 | |transcript_name=ENSMUST00000079949.12 | ||
Revision as of 20:43, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5099339 |
|---|---|
| End of the center position in the TSS region: | 5099340 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000079949.12 |
|---|---|
| Distance: | 58 |
| Num_trans: | 27 |
| All_trans: | ENSMUST00000079949.12:58 ENSMUST00000063232.6:228 AK046434:228 NM_007968:236 NM_001283061:236 NM_001283062:236 NM_001283063:236 uc007hvw.2:236 uc007hvx.2:236 uc007hvy.2:236 uc007hvz.2:236 uc007hwa.2:236 X79233:247 ENSMUST00000073308.10:257 ENSMUST00000151847.1:257 AK049743:257 ENSMUST00000093365.11:258 AK146791:261 AK034755:263 AK151625:265 BC068226:269 AK147103:270 AK153276:279 AK147909:279 AK150345:281 ENSMUST00000102930.9:282 AK019460:287 |
TATA-Box annotation
| Distance to TSS: | 67 |
|---|---|
| Nearest PromoterID: | NM_177370 |
| Entrez ID: | 279766 |
| Nearest Unigene: | Mm.260866 |
| Nearest Refseq: | NM_177370 |
| Nearest Ensembl: | ENSMUSG00000034175 |
| Gene Name: | Ewing sarcoma breakpoint region 1 |
| Gene Alias: | Ptag |
| Gene Description: | rhomboid domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
