Difference between revisions of "TSS:Mm 160801.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc007hwf.1:123 BC012248:209 ENSMUST00000151906.7:363 |chr=chr11 |cpg_percent=0.035 |distance=123 |distance_to_tss=22379 |end=5129843 |entrez_id=140703 |...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |CO-5= | ||
| + | |Emu1= | ||
|all_trans=uc007hwf.1:123 BC012248:209 ENSMUST00000151906.7:363 | |all_trans=uc007hwf.1:123 BC012248:209 ENSMUST00000151906.7:363 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=22379 | |distance_to_tss=22379 | ||
|end=5129843 | |end=5129843 | ||
| + | |end_of_center_position=5129843 | ||
|entrez_id=140703 | |entrez_id=140703 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=AW122071 | + | |gene_alias=AW122071 |
|gene_description=EMI domain containing 1 | |gene_description=EMI domain containing 1 | ||
|gene_id=140703 | |gene_id=140703 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=5129842 | |start=5129842 | ||
| + | |start_of_center_position=5129842 | ||
|strand=- | |strand=- | ||
|transcript_name=uc007hwf.1 | |transcript_name=uc007hwf.1 | ||
Revision as of 20:44, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5129842 |
|---|---|
| End of the center position in the TSS region: | 5129843 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | uc007hwf.1 |
|---|---|
| Distance: | 123 |
| Num_trans: | 3 |
| All_trans: | uc007hwf.1:123 BC012248:209 ENSMUST00000151906.7:363 |
TATA-Box annotation
| Distance to TSS: | 22379 |
|---|---|
| Nearest PromoterID: | NM_080595 |
| Entrez ID: | 140703 |
| Nearest Unigene: | Mm.840 |
| Nearest Refseq: | NM_080595 |
| Nearest Ensembl: | ENSMUSG00000034164 |
| Gene Name: | EMI domain containing 1 |
| Gene Alias: | AW122071 |
| Gene Description: | EMI domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
